WormBase Tree Display for Gene: WBGene00006520
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| WBGene00006520 | SMap | S_parent | Sequence | D2013 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | egli-1 | Paper_evidence | WBPaper00058949 | |||||
| Sequence_name | D2013.10 | ||||||||
| Molecular_name | D2013.10 | ||||||||
| D2013.10.1 | |||||||||
| CE17622 | |||||||||
| Other_name | tag-175 | ||||||||
| CELE_D2013.10 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | egli-1 | ||||||||
| DB_info | Database | AceView | gene | 2J613 | |||||
| WormQTL | gene | WBGene00006520 | |||||||
| WormFlux | gene | WBGene00006520 | |||||||
| NDB | locus_tag | CELE_D2013.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006520|UniProtKB=O62126 | |||||||
| family | PTHR43220 | ||||||||
| NCBI | gene | 183942 | |||||||
| RefSeq | protein | NM_063584.3 | |||||||
| SwissProt | UniProtAcc | O62126 | |||||||
| TREEFAM | TREEFAM_ID | TF314301 | |||||||
| UniProt_GCRP | UniProtAcc | O62126 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 05 Oct 2005 17:16:52 | WBPerson2970 | Event | Acquires_merge | WBGene00008406 | ||||
| Name_change | Sequence_name | D2013.10 | |||||||
| 3 | 02 Jan 2021 22:43:16 | WBPerson1983 | Name_change | CGC_name | egli-1 | ||||
| Other_name | tag-175 | ||||||||
| Acquires_merge | WBGene00008406 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | egli | ||||||||
| Allele (17) | |||||||||
| Strain | WBStrain00001380 | ||||||||
| WBStrain00002447 | |||||||||
| WBStrain00035887 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00037044 | ||||||||
| 00037045 | |||||||||
| 00037046 | |||||||||
| Ortholog (28) | |||||||||
| Paralog | WBGene00013513 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011590 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | tag-175 encodes an ortholog of human TMEM41B, whose protein family is ancient (conserved in both animals and plants) but functionally uncharacterized; TAG-175 is broadly expressed (in hypodermis, muscle, neurons, intestine, spermetheca, and vulva); TAG-175 has no known function in vivo, since neither tag-175(RNAi) nor tag-175(gk278) has obvious phenotypes. | Paper_evidence | WBPaper00006525 | |||||
| WBPaper00025129 | |||||||||
| WBPaper00028877 | |||||||||
| WBPaper00031006 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 10 Dec 2007 00:00:00 | ||||||||
| Automated_description | Predicted to be located in endoplasmic reticulum membrane. Expressed in head; neurons; spermatheca; and vulva. Is an ortholog of human TMEM41B (transmembrane protein 41B). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | D2013.10 | |||||||
| Corresponding_transcript | D2013.10.1 | ||||||||
| Other_sequence (40) | |||||||||
| Associated_feature | WBsf221869 | ||||||||
| WBsf221870 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00062751 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00090586 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00114784 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012561 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00114783 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030378 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00114782 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092950 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062752 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043438 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1461 | ||||||||
| Expr3296 | |||||||||
| Expr5620 | |||||||||
| Expr5621 | |||||||||
| Expr1022225 | |||||||||
| Expr1032675 | |||||||||
| Expr1147434 | |||||||||
| Expr2017234 | |||||||||
| Expr2035370 | |||||||||
| Drives_construct | WBCnstr00002271 | ||||||||
| WBCnstr00004281 | |||||||||
| WBCnstr00011293 | |||||||||
| WBCnstr00034327 | |||||||||
| Construct_product | WBCnstr00034327 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (77) | |||||||||
| Interaction | WBInteraction000031655 | ||||||||
| WBInteraction000196791 | |||||||||
| WBInteraction000293972 | |||||||||
| WBInteraction000393114 | |||||||||
| WBInteraction000399552 | |||||||||
| WBInteraction000417908 | |||||||||
| WBInteraction000432528 | |||||||||
| WBInteraction000463206 | |||||||||
| Map_info | Map | II | Position | 1.18896 | Error | 0.022497 | |||
| Positive | Positive_clone | D2013 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5536 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028877 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00058949 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
