WormBase Tree Display for Gene: WBGene00006068

WBGene00006068 Evidence: Author_evidence: Hodgkin JA
  SMap: S_parent: Sequence: Y71H9A
  Identity: Version: 1
    Name: CGC_name: sto-6 Person_evidence: WBPerson247
      Sequence_name: Y71H9A.2
      Molecular_name: Y71H9A.2
        Y71H9A.2.1
        CE19267
      Other_name: CELE_Y71H9A.2 Accession_evidence: NDB BX284606
      Public_name: sto-6
    DB_info: Database: AceView gene XM253
        WormQTL gene WBGene00006068
        WormFlux gene WBGene00006068
        NDB locus_tag CELE_Y71H9A.2
        Panther gene CAEEL|WormBase=WBGene00006068|UniProtKB=Q9XWC6
          family PTHR10264
        NCBI gene 190619
        RefSeq protein NM_077542.8
        TrEMBL UniProtAcc Q9XWC6
        UniProt_GCRP UniProtAcc Q9XWC6
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:39 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sto
    Allele (71)
    Strain: WBStrain00036315
    RNASeq_FPKM (74)
    GO_annotation: 00103333
      00103334
      00113946
      00113947
    Ortholog: WBGene00058251 Caenorhabditis remanei From_analysis (4)
      WBGene00036959 Caenorhabditis briggsae From_analysis (5)
      WBGene00145659 Caenorhabditis brenneri From_analysis (4)
      WBGene00132574 Caenorhabditis japonica From_analysis (4)
      WBGene00223628 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g11958 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g15388 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g1865 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g18803 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g15787 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g10022 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g5751 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g21894 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g22151 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g12590 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_01119.g15734 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_X.g23135 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold44.g256 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00246.g7880 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_01090 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_023816 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01097 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_X0091800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g20100 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00239089 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00111326 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00289082 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0030993 Drosophila melanogaster From_analysis (2)
      ZFIN:ZDB-GENE-050417-63 Danio rerio From_analysis (2)
    Paralog: WBGene00003166 Caenorhabditis elegans From_analysis (3)
      WBGene00006063 Caenorhabditis elegans From_analysis (3)
      WBGene00006064 Caenorhabditis elegans From_analysis (3)
      WBGene00006065 Caenorhabditis elegans From_analysis (3)
      WBGene00006066 Caenorhabditis elegans From_analysis (2)
      WBGene00006067 Caenorhabditis elegans From_analysis (3)
      WBGene00006761 Caenorhabditis elegans From_analysis (3)
      WBGene00006741 Caenorhabditis elegans From_analysis (3)
      WBGene00006061 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in plasma membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y71H9A.2
    Corresponding_transcript: Y71H9A.2.1
    Other_sequence: MHC03789_1
      MH07830
    Associated_feature (11)
  Experimental_info: RNAi_result: WBRNAi00037797 Inferred_automatically: RNAi_primary
      WBRNAi00058278 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015253
      Expr1161688
      Expr2016974
      Expr2035122
    Drives_construct: WBCnstr00021236
      WBCnstr00021678
      WBCnstr00034560
    Construct_product: WBCnstr00034560
    Microarray_results (19)
    Expression_cluster (122)
    Interaction (25)
  Map_info: Map: X Position: 5.21838 Error: 0.051233
    Positive: Positive_clone: Y71H9A Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00030154
    WBPaper00038491
    WBPaper00039235
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene