WormBase Tree Display for Gene: WBGene00006065
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WBGene00006065 | SMap | S_parent | Sequence | F52D10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | sto-3 | Person_evidence | WBPerson247 | |||||
Sequence_name | F52D10.5 | ||||||||
Molecular_name | F52D10.5 | ||||||||
F52D10.5.1 | |||||||||
CE03391 | |||||||||
Other_name | CELE_F52D10.5 | Accession_evidence | NDB | BX284606 | |||||
Public_name | sto-3 | ||||||||
DB_info | Database | AceView | gene | XM238 | |||||
WormQTL | gene | WBGene00006065 | |||||||
WormFlux | gene | WBGene00006065 | |||||||
NDB | locus_tag | CELE_F52D10.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00006065|UniProtKB=Q20657 | |||||||
family | PTHR10264 | ||||||||
NCBI | gene | 191966 | |||||||
RefSeq | protein | NM_077540.2 | |||||||
SwissProt | UniProtAcc | Q20657 | |||||||
UniProt_GCRP | UniProtAcc | Q20657 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:39 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | sto | ||||||||
Allele (42) | |||||||||
Legacy_information | [Barnes TM] sto for STOmatin family. Predicted gene F52D10.5 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00068718 | ||||||||
00068719 | |||||||||
00068720 | |||||||||
00113940 | |||||||||
00113941 | |||||||||
Ortholog (24) | |||||||||
Paralog | WBGene00003166 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00006063 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00006064 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00006761 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00006741 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00006068 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00006066 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00006067 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00006061 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to be located in plasma membrane. Expressed in RIB; ray neuron type B; and tail. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F52D10.5 | |||||||
Corresponding_transcript | F52D10.5.1 | ||||||||
Other_sequence | BXC02315_1 | ||||||||
Experimental_info | RNAi_result | WBRNAi00015398 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00032608 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00047965 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr12806 | ||||||||
Expr14281 | |||||||||
Expr1023509 | |||||||||
Expr1151784 | |||||||||
Expr2016971 | |||||||||
Expr2035119 | |||||||||
Drives_construct | WBCnstr00018493 | ||||||||
WBCnstr00019943 | |||||||||
WBCnstr00019944 | |||||||||
WBCnstr00022785 | |||||||||
WBCnstr00034563 | |||||||||
WBCnstr00040699 | |||||||||
Construct_product | WBCnstr00034563 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (68) | |||||||||
Interaction (52) | |||||||||
Map_info | Map | X | Position | 5.10639 | Error | 0.049781 | |||
Positive | Positive_clone | F52D10 | Person_evidence | WBPerson43 | |||||
Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00030154 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00056324 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |