WormBase Tree Display for Gene: WBGene00006066
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WBGene00006066 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | sto-4 | Person_evidence | WBPerson247 | |||||
Sequence_name | Y71H9A.3 | ||||||||
Molecular_name | Y71H9A.3 | ||||||||
Y71H9A.3.1 | |||||||||
CE22957 | |||||||||
Y71H9A.3.2 | |||||||||
Other_name | CELE_Y71H9A.3 | Accession_evidence | NDB | BX284606 | |||||
Public_name | sto-4 | ||||||||
DB_info | Database | AceView | gene | XM265 | |||||
WormQTL | gene | WBGene00006066 | |||||||
WormFlux | gene | WBGene00006066 | |||||||
NDB | locus_tag | CELE_Y71H9A.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00006066|UniProtKB=Q22165 | |||||||
family | PTHR10264 | ||||||||
NCBI | gene | 181350 | |||||||
RefSeq | protein | NM_077543.5 | |||||||
SwissProt | UniProtAcc | Q22165 | |||||||
UniProt_GCRP | UniProtAcc | Q22165 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:39 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | sto | ||||||||
Allele (54) | |||||||||
Legacy_information | [Barnes TM] sto for STOmatin family. Predicted gene T04F8.5 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00074400 | ||||||||
00074401 | |||||||||
00074402 | |||||||||
00113942 | |||||||||
00113943 | |||||||||
Ortholog (29) | |||||||||
Paralog | WBGene00003166 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00006063 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00006064 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00006065 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00006761 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00006741 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00006068 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00006067 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00006061 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to be located in plasma membrane. Expressed in neurons. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y71H9A.3 | |||||||
Corresponding_transcript | Y71H9A.3.1 | ||||||||
Y71H9A.3.2 | |||||||||
Other_sequence (19) | |||||||||
Associated_feature (13) | |||||||||
Experimental_info | RNAi_result (5) | ||||||||
Expr_pattern | Expr4854 | ||||||||
Expr1026276 | |||||||||
Expr1032540 | |||||||||
Expr1161689 | |||||||||
Expr2016972 | |||||||||
Expr2035120 | |||||||||
Drives_construct | WBCnstr00012282 | ||||||||
WBCnstr00034562 | |||||||||
Construct_product | WBCnstr00034562 | ||||||||
Microarray_results (25) | |||||||||
Expression_cluster (176) | |||||||||
Interaction (25) | |||||||||
Map_info | Map | X | Position | 5.33803 | Error | 0.196943 | |||
Positive | Positive_clone | T04F8 | Person_evidence | WBPerson43 | |||||
Y71H9A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
Mapping_data | Multi_point | 4411 | |||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00024163 | ||||||||
WBPaper00030154 | |||||||||
WBPaper00030839 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00065227 | |||||||||
Remark | T04F8.5 subsumed into Y71H9A.3.[sdm 000921] | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |