WormBase Tree Display for Gene: WBGene00006063
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WBGene00006063 | SMap | S_parent | Sequence | F08C6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name (5) | |||||||||
DB_info | Database | WormQTL | gene | WBGene00006063 | |||||
WormFlux | gene | WBGene00006063 | |||||||
NDB | locus_tag | CELE_F08C6.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00006063|UniProtKB=Q19200 | |||||||
family | PTHR10264 | ||||||||
NCBI | gene | 181017 | |||||||
RefSeq | protein | NM_076880.8 | |||||||
NM_001129652.6 | |||||||||
SwissProt | UniProtAcc | Q19200 | |||||||
TrEMBL | UniProtAcc | G8JY63 | |||||||
UniProt_GCRP | UniProtAcc | Q19200 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:39 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | sto | ||||||||
Allele (43) | |||||||||
Legacy_information | [Barnes TM] sto for STOmatin family. Predicted gene F08C6.4 | ||||||||
Strain | WBStrain00003557 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00021118 | ||||||||
00063839 | |||||||||
00063840 | |||||||||
00113936 | |||||||||
00113937 | |||||||||
Ortholog (29) | |||||||||
Paralog | WBGene00003166 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00006761 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00006741 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00006068 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00006066 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00006065 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00006064 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00006067 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00006061 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to be located in plasma membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F08C6.4a | |||||||
F08C6.4b | |||||||||
Corresponding_CDS_history | F08C6.4:wp176 | ||||||||
Corresponding_transcript | F08C6.4a.1 | ||||||||
F08C6.4b.1 | |||||||||
Other_sequence | CJC17053_1 | ||||||||
Associated_feature (14) | |||||||||
Experimental_info | RNAi_result | WBRNAi00030640 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012871 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00043980 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr5680 | ||||||||
Expr1019596 | |||||||||
Expr1032538 | |||||||||
Expr1147954 | |||||||||
Expr2016969 | |||||||||
Expr2035117 | |||||||||
Drives_construct | WBCnstr00004009 | ||||||||
WBCnstr00034564 | |||||||||
Construct_product | WBCnstr00034564 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (283) | |||||||||
Interaction (69) | |||||||||
Map_info | Map | X | Position | -1.59599 | Error | 0.010026 | |||
Positive | Positive_clone | F08C6 | Person_evidence | WBPerson43 | |||||
Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
Mapping_data | Multi_point | 5567 | |||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00026601 | ||||||||
WBPaper00030154 | |||||||||
WBPaper00034222 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |