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WormBase Tree Display for Gene: WBGene00006063

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Name Class

WBGene00006063SMapS_parentSequenceF08C6
IdentityVersion1
NameCGC_namesto-1Person_evidenceWBPerson247
Sequence_nameF08C6.4
Molecular_nameF08C6.4a
F08C6.4a.1
CE27924
F08C6.4b
CE41113
F08C6.4b.1
Other_nameCELE_F08C6.4Accession_evidenceNDBBX284606
Public_namesto-1
DB_infoDatabaseWormQTLgeneWBGene00006063
WormFluxgeneWBGene00006063
NDBlocus_tagCELE_F08C6.4
PanthergeneCAEEL|WormBase=WBGene00006063|UniProtKB=Q19200
familyPTHR10264
NCBIgene181017
RefSeqproteinNM_076880.8
NM_001129652.6
SwissProtUniProtAccQ19200
TrEMBLUniProtAccG8JY63
UniProt_GCRPUniProtAccQ19200
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:39WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsto
AlleleWBVar01849186
WBVar00508735
WBVar00508736
WBVar00508737
WBVar00508738
WBVar01499933
WBVar01499934
WBVar00250495
WBVar01499760
WBVar01499761
WBVar01601947
WBVar01499642
WBVar02052577
WBVar01941445
WBVar01550512
WBVar01161681
WBVar01161682
WBVar01161683
WBVar01161684
WBVar01161685
WBVar01161686
WBVar01161687
WBVar01883629
WBVar01161688
WBVar01883630
WBVar00080562
WBVar01883631
WBVar01161689
WBVar01161690
WBVar01883632
WBVar01883633
WBVar01161691
WBVar01883634
WBVar01161692
WBVar01883635
WBVar01161693
WBVar01499867
WBVar01161694
WBVar01883636
WBVar01161695
WBVar01161696
WBVar00254667
WBVar01500067
Legacy_information[Barnes TM] sto for STOmatin family. Predicted gene F08C6.4
StrainWBStrain00003557
RNASeq_FPKM (74)
GO_annotation00021118
00063839
00063840
00113936
00113937
Ortholog (29)
ParalogWBGene00003166Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006761Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006741Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006068Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006066Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00006065Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006064Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006067Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006061Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in plasma membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF08C6.4a
F08C6.4b
Corresponding_CDS_historyF08C6.4:wp176
Corresponding_transcriptF08C6.4a.1
F08C6.4b.1
Other_sequenceCJC17053_1
Associated_feature (14)
Experimental_infoRNAi_resultWBRNAi00030640Inferred_automaticallyRNAi_primary
WBRNAi00012871Inferred_automaticallyRNAi_primary
WBRNAi00043980Inferred_automaticallyRNAi_primary
Expr_patternExpr5680
Expr1019596
Expr1032538
Expr1147954
Expr2016969
Expr2035117
Drives_constructWBCnstr00004009
WBCnstr00034564
Construct_productWBCnstr00034564
Microarray_results (20)
Expression_cluster (283)
Interaction (69)
Map_infoMapXPosition-1.59599Error0.010026
PositivePositive_cloneF08C6Person_evidenceWBPerson43
Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point5567
Pseudo_map_position
ReferenceWBPaper00026601
WBPaper00030154
WBPaper00034222
WBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene