WormBase Tree Display for Gene: WBGene00005646

WBGene00005646 SMap: S_parent: Sequence: C03G6
  Identity: Version: 2
    Name: CGC_name: srp-5 Person_evidence: WBPerson1460
      Sequence_name: C03G6.18
      Molecular_name: C03G6.18
      Other_name: CELE_C03G6.18 Accession_evidence: NDB BX284605
      Public_name: srp-5
    DB_info: Database: AceView gene 5H860
        WormQTL gene WBGene00005646
        WormFlux gene WBGene00005646
        NDB locus_tag CELE_C03G6.18
        NCBI gene 191959
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:38 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 03 Sep 2014 17:01:34 WBPerson4025 Event: Changed_class: CDS Pseudogene
    Status: Live
  Gene_info: Biotype: SO:0000336
    Gene_class: srp
    Allele (22)
    RNASeq_FPKM (74)
    Ortholog: WBGene00151415 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00145699 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00142128 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00219155 Caenorhabditis japonica From_analysis: Inparanoid_8
      WBGene00121162 Caenorhabditis japonica From_analysis: Inparanoid_8
      WBGene00080449 Caenorhabditis remanei From_analysis: Inparanoid_8
      WBGene00080563 Caenorhabditis remanei From_analysis: Inparanoid_8
      WBGene00080437 Caenorhabditis remanei From_analysis: Inparanoid_8
      WBGene00102097 Pristionchus pacificus From_analysis: Inparanoid_8
    Structured_description: Concise_description: srp-5 encodes an ovalbumin-like serpin (ov-serpin) member of the serine protease inhibitor superfamily; by homology, SRP-5 is predicted to function as a suicide substrate that inhibits the proteolytic activity of serine proteases; however, as loss of srp-5 function via RNA-mediated interference (RNAi) does not result in any obvious abnormalities, the precise role of SRP-5 in C. elegans development and/or behavior is not yet known. Paper_evidence: WBPaper00005654
            WBPaper00010613
            WBPaper00012880
            WBPaper00017560
          Curator_confirmed: WBPerson1843
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in body wall muscle cell and hypodermis based on tiling array studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on microarray and RNA-seq studies. Is affected by Hydrolyzable Tannins; Humic Substances; and Sirolimus based on microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS_history: C03G6.18:wp128
      C03G6.18:wp245
    Corresponding_pseudogene: C03G6.18
    Other_sequence (53)
  Experimental_info: Expr_pattern: Expr1022943
      Expr1143650
    Microarray_results (18)
    Expression_cluster (75)
    Interaction (19)
  Map_info: Map: V Position: 0.742373 Error: 0.002171
    Positive: Positive_clone: C03G6 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4701
    Pseudo_map_position
  Reference: WBPaper00006476
    WBPaper00026792
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene