WormBase Tree Display for Gene: WBGene00005646
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WBGene00005646 | SMap | S_parent | Sequence | C03G6 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0000336 | |||||
Gene_class | srp | ||||||
Allele (22) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | WBGene00151415 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||
WBGene00145699 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||
WBGene00142128 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||
WBGene00219155 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||
WBGene00121162 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||
WBGene00080449 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||
WBGene00080563 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||
WBGene00080437 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||
WBGene00102097 | Pristionchus pacificus | From_analysis | Inparanoid_8 | ||||
Structured_description | Concise_description | srp-5 encodes an ovalbumin-like serpin (ov-serpin) member of the serine protease inhibitor superfamily; by homology, SRP-5 is predicted to function as a suicide substrate that inhibits the proteolytic activity of serine proteases; however, as loss of srp-5 function via RNA-mediated interference (RNAi) does not result in any obvious abnormalities, the precise role of SRP-5 in C. elegans development and/or behavior is not yet known. | Paper_evidence | WBPaper00005654 | |||
WBPaper00010613 | |||||||
WBPaper00012880 | |||||||
WBPaper00017560 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Enriched in body wall muscle cell and hypodermis based on tiling array studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on microarray and RNA-seq studies. Is affected by Hydrolyzable Tannins; Humic Substances; and Sirolimus based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS_history | C03G6.18:wp128 | |||||
C03G6.18:wp245 | |||||||
Corresponding_pseudogene | C03G6.18 | ||||||
Other_sequence (53) | |||||||
Experimental_info | Expr_pattern | Expr1022943 | |||||
Expr1143650 | |||||||
Microarray_results (18) | |||||||
Expression_cluster (75) | |||||||
Interaction (19) | |||||||
Map_info | Map | V | Position | 0.742373 | Error | 0.002171 | |
Positive | Positive_clone | C03G6 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Mapping_data | Multi_point | 4701 | |||||
Pseudo_map_position | |||||||
Reference | WBPaper00006476 | ||||||
WBPaper00026792 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |