WormBase Tree Display for Gene: WBGene00004510

WBGene00004510 SMap: S_parent: Sequence: CHROMOSOME_II
  Identity: Version: 2
    Name: CGC_name: rrf-3 Person_evidence: WBPerson398
      Sequence_name: F10B5.7
      Molecular_name: F10B5.7
        F10B5.7.1
        CE45624
      Other_name: fer-15 Person_evidence: WBPerson680
        CELE_F10B5.7 Accession_evidence: NDB BX284602
      Public_name: rrf-3
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:35 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 06 Jun 2016 10:55:30 WBPerson2970 Event: Acquires_merge: WBGene00001421
              Name_change: Other_name: fer-15
      Acquires_merge: WBGene00001421
    Status: Live
  Gene_info (12)
  Molecular_info: Corresponding_CDS: F10B5.7
    Corresponding_CDS_history: F10B5.7:wp222
    Corresponding_transcript: F10B5.7.1
    Other_sequence: Acan_isotig16813
      CBC02376_1
      AE03845
      JI164335.1
      AYC02866_1
      Tcir_isotig07024
      JI471910.1
      HQ611979.1
    Associated_feature: WBsf644446
  Experimental_info: RNAi_result: WBRNAi00000533 Inferred_automatically: RNAi_primary
      WBRNAi00044213 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram279
      Expr5712
      Expr1017743
      Expr1032312
      Expr1148172
      Expr2015545
      Expr2033780
    Drives_construct: WBCnstr00002564
      WBCnstr00035434
    Construct_product: WBCnstr00035434
    Regulate_expr_cluster (15)
    Antibody: WBAntibody00002898
      WBAntibody00002903
    Microarray_results (19)
    Expression_cluster: WBPaper00027057:DCR-1_interacting_embryo
      WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00044426:rotenone_24h_downregulated
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044760:germline_specific
      WBPaper00045521:Gender_Neutral
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
      WBPaper00048762:FOG-3_associated
      WBPaper00048988:neuron_expressed
      WBPaper00049732:blmp-1(tm548)_vs_N2_upregulated
      WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
      WBPaper00049920:Glucose-Diet_downregulated_N2
      WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:hypodermis_enriched
      WBPaper00050990:hypodermis_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051265:F4_morc-1(tm6048)_upregulated
      WBPaper00051404:alg-1(gk214)_upregulated
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053289:DREAM-target
      WBPaper00053302:alovudine_24h_regulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053810:nuo-6(qm200)_downregulated
      WBPaper00055060:flr-1(RNAi)_upregulated
      WBPaper00055334:DLC-1_interacting
      WBPaper00055482:pmt-2(RNAi)_downregulated
      WBPaper00055648:germline_expressed
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056034:pals-22(jy3)_downregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056169:rrf-3(pk1426)_downregulated_embryo
      WBPaper00056169:rrf-3(pk1426)_downregulated_L1
      WBPaper00056169:rrf-3(pk1426)_downregulated_L2
      WBPaper00056443:sek-1(km4)_downregulated
      WBPaper00056868:P.aeruginosa_upregulated_smallRNA
      WBPaper00057288:Cold_downregulated_transcript
      WBPaper00058691:cfp-1(tm6369)_downregulated
      WBPaper00058691:set-2(bn129)_downregulated
      WBPaper00058691:sin-3(tm1276)_downregulated
      WBPaper00059356:set-6(ok2195)_baz-2(tm0235)_regulated
      WBPaper00059664:srbc-48(ac23)_downregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060445:ikb-1(nr2027)_upregulated_L4
      WBPaper00060445:nfki-1(cer1)_upregulated_L4
      WBPaper00060661:sensory-neuron_depleted
      WBPaper00060683:hlh-11(ko1)_downregulated
      WBPaper00061340:Parent_of_K_Kprime
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061439:unc-30(ok613)_downregulated
      WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
      WBPaper00061527:lst-4_22151-F46F11.6_12556
      WBPaper00061902:camt-1(ok515)_regulated_RMG
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062193:hsf-1(RNAi)_downregulated
      WBPaper00062193:skn-1(RNAi)_downregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062590:Aging_downregulated_body-wall-muscle
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064716:paraquat_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065225:nhr-42(tm1375)_upregulated_S.aureus-infected
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066110:tetraploid_vs_diploid_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026980:intestine_enriched
      WBPaper00028482:PA14_downregulated
      WBPaper00035560:ahr-1_upregulated
      WBPaper00035873:dpy-9_regulated
      WBPaper00035905:FBF-1_Associated
      WBPaper00036123:Atrazine_regulated
      WBPaper00036123:Fluoranthene_regulated
      WBPaper00036286:Pattern_B
      WBPaper00037611:GLD-2-associated
      WBPaper00037611:RNP-8-associated
      WBPaper00040858:eQTL_age_regulated_aging
      WBPaper00040858:eQTL_regulated_aging
      WBPaper00040858:eQTL_regulated_old
      WBPaper00041002:HF_3d_2.0mM_Down
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00048989:N2_allantoin_upregulated
      WBPaper00053236:Starvation_regulated_GR1307
      [cgc5376]:let-60(G12V)-regulated_genes
      [cgc5767]:cluster_15
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(101_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_ME
      [cgc6390]:Cluster_F
      [cgc6390]:intrinsic
    Interaction (149)
    WBProcess: WBbiopr:00000039
      WBbiopr:00000057
  Map_info: Map: II Position: 0.738281 Error: 0.001232
    Positive: Positive_clone: F10B5 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4646
        4965
        838
        839
        1063
        1068
        1072
      Pos_neg_data: 1530
        1531
        2636
        2638
        2640
        2642
        2644
        2646
        2648
        2650
        2652
        2654
        2656
        2658
        2660
        2662
        2664
        2666
        2668
        2670
        2635
        2637
        2639
        2641
        2643
        2645
        2647
        2649
        2651
        2653
        2655
        2657
        2659
        2661
        2663
        2665
        2667
        2669
    Pseudo_map_position
  Reference (259)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene