WormBase Tree Display for Gene: WBGene00004510

WBGene00004510 SMap: S_parent: Sequence: CHROMOSOME_II
  Identity: Version: 2
    Name: CGC_name: rrf-3 Person_evidence: WBPerson398
      Sequence_name: F10B5.7
      Molecular_name: F10B5.7
        F10B5.7.1
        CE45624
      Other_name: fer-15 Person_evidence: WBPerson680
        CELE_F10B5.7 Accession_evidence: NDB BX284602
      Public_name: rrf-3
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:35 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 06 Jun 2016 10:55:30 WBPerson2970 Event: Acquires_merge: WBGene00001421
              Name_change: Other_name: fer-15
      Acquires_merge: WBGene00001421
    Status: Live
  Gene_info (12)
  Molecular_info: Corresponding_CDS: F10B5.7
    Corresponding_CDS_history: F10B5.7:wp222
    Corresponding_transcript: F10B5.7.1
    Other_sequence: Acan_isotig16813
      CBC02376_1
      AE03845
      JI164335.1
      AYC02866_1
      Tcir_isotig07024
      JI471910.1
      HQ611979.1
    Associated_feature: WBsf644446
  Experimental_info: RNAi_result: WBRNAi00000533 Inferred_automatically: RNAi_primary
      WBRNAi00044213 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram279
      Expr5712
      Expr1017743
      Expr1032312
      Expr1148172
      Expr2015545
      Expr2033780
    Drives_construct: WBCnstr00002564
      WBCnstr00035434
    Construct_product: WBCnstr00035434
    Regulate_expr_cluster (15)
    Antibody: WBAntibody00002898
      WBAntibody00002903
    Microarray_results (19)
    Expression_cluster: WBPaper00027057:DCR-1_interacting_embryo
      WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00044426:rotenone_24h_downregulated
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044760:germline_specific
      WBPaper00045521:Gender_Neutral
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
      WBPaper00048762:FOG-3_associated
      WBPaper00048988:neuron_expressed
      WBPaper00049732:blmp-1(tm548)_vs_N2_upregulated
      WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
      WBPaper00049920:Glucose-Diet_downregulated_N2
      WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:hypodermis_enriched
      WBPaper00050990:hypodermis_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051265:F4_morc-1(tm6048)_upregulated
      WBPaper00051404:alg-1(gk214)_upregulated
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053289:DREAM-target
      WBPaper00053302:alovudine_24h_regulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053810:nuo-6(qm200)_downregulated
      WBPaper00055060:flr-1(RNAi)_upregulated
      WBPaper00055334:DLC-1_interacting
      WBPaper00055482:pmt-2(RNAi)_downregulated
      WBPaper00055648:germline_expressed
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056034:pals-22(jy3)_downregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056169:rrf-3(pk1426)_downregulated_embryo
      WBPaper00056169:rrf-3(pk1426)_downregulated_L1
      WBPaper00056169:rrf-3(pk1426)_downregulated_L2
      WBPaper00056443:sek-1(km4)_downregulated
      WBPaper00056868:P.aeruginosa_upregulated_smallRNA
      WBPaper00057288:Cold_downregulated_transcript
      WBPaper00058691:cfp-1(tm6369)_downregulated
      WBPaper00058691:set-2(bn129)_downregulated
      WBPaper00058691:sin-3(tm1276)_downregulated
      WBPaper00059356:set-6(ok2195)_baz-2(tm0235)_regulated
      WBPaper00059664:srbc-48(ac23)_downregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060445:ikb-1(nr2027)_upregulated_L4
      WBPaper00060445:nfki-1(cer1)_upregulated_L4
      WBPaper00060661:sensory-neuron_depleted
      WBPaper00060683:hlh-11(ko1)_downregulated
      WBPaper00061340:Parent_of_K_Kprime
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061439:unc-30(ok613)_downregulated
      WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
      WBPaper00061527:lst-4_22151-F46F11.6_12556
      WBPaper00061902:camt-1(ok515)_regulated_RMG
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062193:hsf-1(RNAi)_downregulated
      WBPaper00062193:skn-1(RNAi)_downregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062590:Aging_downregulated_body-wall-muscle
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064716:paraquat_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065225:nhr-42(tm1375)_upregulated_S.aureus-infected
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066110:tetraploid_vs_diploid_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026980:intestine_enriched
      WBPaper00028482:PA14_downregulated
      WBPaper00035560:ahr-1_upregulated
      WBPaper00035873:dpy-9_regulated
      WBPaper00035905:FBF-1_Associated
      WBPaper00036123:Atrazine_regulated
      WBPaper00036123:Fluoranthene_regulated
      WBPaper00036286:Pattern_B
      WBPaper00037611:GLD-2-associated
      WBPaper00037611:RNP-8-associated
      WBPaper00040858:eQTL_age_regulated_aging
      WBPaper00040858:eQTL_regulated_aging
      WBPaper00040858:eQTL_regulated_old
      WBPaper00041002:HF_3d_2.0mM_Down
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00048989:N2_allantoin_upregulated
      WBPaper00053236:Starvation_regulated_GR1307
      [cgc5376]:let-60(G12V)-regulated_genes
      [cgc5767]:cluster_15
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(101_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_ME
      [cgc6390]:Cluster_F
      [cgc6390]:intrinsic
    Interaction (149)
    WBProcess: WBbiopr:00000039
      WBbiopr:00000057
  Map_info: Map: II Position: 0.738281 Error: 0.001232
    Positive: Positive_clone: F10B5 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4646
        4965
        838
        839
        1063
        1068
        1072
      Pos_neg_data (38)
    Pseudo_map_position
  Reference (259)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene