Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00004114

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00004114SMapS_parentSequenceD1044
IdentityVersion1
NameCGC_namepqn-25Person_evidenceWBPerson625
Sequence_nameD1044.3
Molecular_nameD1044.3
D1044.3.1
CE29743
Other_nameCELE_D1044.3Accession_evidenceNDBBX284603
Public_namepqn-25
DB_infoDatabaseAceViewgene3G600
WormQTLgeneWBGene00004114
WormFluxgeneWBGene00004114
NDBlocus_tagCELE_D1044.3
PanthergeneCAEEL|WormBase=WBGene00004114|UniProtKB=P41951
familyPTHR37157
NCBIgene175759
RefSeqproteinNM_171123.6
SwissProtUniProtAccP41951
TREEFAMTREEFAM_IDTF351707
UniProt_GCRPUniProtAccP41951
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:34WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpqn
Allele (46)
RNASeq_FPKM (74)
GO_annotation00045578
00045579
Ortholog (29)
ParalogWBGene00012942Caenorhabditis elegansFrom_analysisPanther
WBGene00017032Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015218Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
Structured_descriptionConcise_descriptionThe protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).Paper_evidenceWBPaper00005068
WBPaper00012788
WBPaper00012830
WBPaper00012882
WBPaper00012897
WBPaper00013003
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to be located in membrane. Expressed in intestine and pharyngeal gland cell.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSD1044.3
Corresponding_CDS_historyD1044.3:wp88
Corresponding_transcriptD1044.3.1
Other_sequenceAcan_isotig08625
Tcol_isotig16573
EY470454.1
FC539962.1
EY470963.1
CJC00793_1
CBC03309_1
ACC08464_1
Associated_featureWBsf992416
WBsf992417
WBsf1014898
WBsf226688
Experimental_infoRNAi_resultWBRNAi00000909Inferred_automaticallyRNAi_primary
Expr_patternExpr10182
Expr1011921
Expr1147355
Expr2015041
Expr2033276
Drives_constructWBCnstr00035686
Construct_productWBCnstr00035686
Microarray_results (17)
Expression_clusterWBPaper00024970:GABAergic_neuron_specific
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00040221:DAF-12_target_ALF4
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00042561:smgl-2(RNAi)_upregulated
WBPaper00044037:eat-2_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00045571:germline-ablation_upregulated
WBPaper00045774:clk-1_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049920:hyl-2(tm2031)_upregulated
WBPaper00050080:rbr-2(tm3141)_downregulated
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053154:human-amyloid-beta_tau_regulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053388:dauer_regulated_Cluster2
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055626:pry-1(mu38)_downregulated
WBPaper00055648:nerve-ring_expressed
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
WBPaper00055971:nhl-2(ok818)_20C_downregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056617:adr-1_upregulated_embryo_transcript
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057068:numr-1(RNAi)_downregulated
WBPaper00057143:ztf-11(RNAi)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058711:skn-1(lax188)_downregulated
WBPaper00058711:wdr-5(ok1417)_upregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00058948:npr-8(ok1439)_downregulated_OP50
WBPaper00058948:npr-8(ok1439)_downregulated_PA14
WBPaper00059117:B.subtilis_upregulated
WBPaper00059334:sacy-1(depletion)_regulated
WBPaper00059566:wdr-23(mac32)_upregulated
WBPaper00059609:malt-1_ilc-17.1_nfki-1_downregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00059895:wounding_upregulated
WBPaper00060084:cco-1(RNAi)_upregulated_lin-40(yth27)
WBPaper00060273:isp-1(qm150)_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060445:ikb-1(nr2027)_upregulated_L4
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060661:sensory-neuron_depleted
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061040:eat-2(ad1116)_upregulated
WBPaper00061340:ALM_BDU
WBPaper00061340:g1A
WBPaper00061340:g1A_g1P
WBPaper00061340:g1A_parent
WBPaper00061340:g1P
WBPaper00061340:g2
WBPaper00061340:Parent_of_g1P_I3
WBPaper00061340:XXX
WBPaper00061341:28C_24h_upregulated
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061527:M04G7.1-R06F6.7
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064156:lbp-3(overexpress)_upregulated
WBPaper00064156:lipl-4(overexpress)_upregulated
WBPaper00064539:nhr-114(gk849)_upregulated
WBPaper00064637:cox-5B(RNAi)_upregulated
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065258:anchor-cell_enriched
WBPaper00065841:41_0
WBPaper00065841:41_1
WBPaper00065841:41_2
WBPaper00065841:78_0
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00025141:N2_Expressed_Genes
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:24hr_muscle_depleted
WBPaper00031003:hlh_1_enriched
WBPaper00031003:total_muscle_depleted
WBPaper00031832:slr-2_regulated
WBPaper00035227:heat_shock_regulated
WBPaper00036286:Pattern_I
WBPaper00037113:Diazinon_16C_regulated
WBPaper00038172:crh-1null_up_regulated
WBPaper00038172:tax-6null_up_regulated
WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
WBPaper00040985:AIN-2_asynchronous_muscle
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_EtBr-exposed_51h
WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045673:colistin_downregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00048989:eat-2(ad465)_upregulated_in-DMSO
WBPaper00048989:N2_allantoin_downregulated
WBPaper00050407:hsp-6(RNAi)_upregulated
WBPaper00053236:Starvation_regulated_N2
WBPaper00053550:daf-19(m86)_downregulated_L1
WBPaper00057098:SiO2-nanoparticles_upregulated
InteractionWBInteraction000356953
Map_infoMapIIIPosition-1.60108Error0.011084
PositivePositive_cloneD1044Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00027258
WBPaper00038491
WBPaper00041771
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene