WormBase Tree Display for Gene: WBGene00004076
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WBGene00004076 | SMap | S_parent | Sequence | W09B6 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | pod | |||||
Allele (335) | ||||||
Possibly_affected_by | WBVar02153249 | |||||
Strain | WBStrain00008572 | |||||
WBStrain00049317 | ||||||
WBStrain00054654 | ||||||
WBStrain00054709 | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation (25) | ||||||
Ortholog (46) | ||||||
Paralog | WBGene00012131 | Caenorhabditis elegans | From_analysis | Panther | ||
WormBase-Compara | ||||||
WBGene00004258 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00009319 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00017864 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Concise_description | pod-2 encodes an acetyl-CoA carboxylase; by sequence similarity, POD-2 is predicted to catalyze the first step in de novo fatty acid biosynthesis; pod-2 is required for proper embryonic polarity and for osmotic protection of the eggshell; pod-2 activity is also required for molting. | Paper_evidence | WBPaper00004706 | ||
WBPaper00005095 | ||||||
WBPaper00024324 | ||||||
WBPaper00026763 | ||||||
Curator_confirmed | WBPerson1843 | |||||
Date_last_updated | 14 Oct 2008 00:00:00 | |||||
Automated_description | Predicted to enable acetyl-CoA carboxylase activity. Involved in several processes, including establishment or maintenance of epithelial cell apical/basal polarity; nematode larval development; and polarity specification of anterior/posterior axis. Predicted to be located in endoplasmic reticulum membrane and mitochondrion. Expressed in CANL; CANR; and excretory duct. Used to study muscular disease. Is an ortholog of human ACACA (acetyl-CoA carboxylase alpha). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Experimental_model | DOID:0080000 | Homo sapiens | Paper_evidence | WBPaper00061805 | |
Curator_confirmed | WBPerson324 | |||||
Date_last_updated | 25 Apr 2022 00:00:00 | |||||
Models_disease_in_annotation | WBDOannot00001162 | |||||
Molecular_info | Corresponding_CDS | W09B6.1a | ||||
W09B6.1b | ||||||
W09B6.1c | ||||||
Corresponding_transcript | W09B6.1a.1 | |||||
W09B6.1a.2 | ||||||
W09B6.1a.3 | ||||||
W09B6.1a.4 | ||||||
W09B6.1b.1 | ||||||
W09B6.1c.1 | ||||||
Other_sequence (71) | ||||||
Associated_feature (18) | ||||||
Experimental_info | RNAi_result (24) | |||||
Expr_pattern | Chronogram1203 | |||||
Expr6859 | ||||||
Expr9289 | ||||||
Expr12921 | ||||||
Expr15196 | ||||||
Expr1021344 | ||||||
Expr1031965 | ||||||
Expr1158544 | ||||||
Expr2014988 | ||||||
Expr2033223 | ||||||
Drives_construct | WBCnstr00003313 | |||||
WBCnstr00013878 | ||||||
WBCnstr00023095 | ||||||
Regulate_expr_cluster | WBPaper00038215:pod-2(RNAi)_regulated | |||||
Microarray_results (29) | ||||||
Expression_cluster (167) | ||||||
Interaction (107) | ||||||
Map_info | Map | II | Position | -15.5649 | ||
Positive | Positive_clone | W09B6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Mapping_data | Multi_point | 5516 | ||||
4672 | ||||||
Pseudo_map_position | ||||||
Reference (45) | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |