WormBase Tree Display for Gene: WBGene00004076
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WBGene00004076 | SMap | S_parent | Sequence | W09B6 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | pod-2 | Person_evidence | WBPerson26 | |||
Sequence_name | W09B6.1 | ||||||
Molecular_name (12) | |||||||
Other_name | phi-47 | Person_evidence | WBPerson2582 | ||||
CELE_W09B6.1 | Accession_evidence | NDB | BX284602 | ||||
Public_name | pod-2 | ||||||
DB_info | Database (12) | ||||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | pod | ||||||
Allele (335) | |||||||
Possibly_affected_by | WBVar02153249 | ||||||
Strain | WBStrain00008572 | ||||||
WBStrain00049317 | |||||||
WBStrain00054654 | |||||||
WBStrain00054709 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (25) | |||||||
Ortholog (46) | |||||||
Paralog | WBGene00012131 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00004258 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00009319 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00017864 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | pod-2 encodes an acetyl-CoA carboxylase; by sequence similarity, POD-2 is predicted to catalyze the first step in de novo fatty acid biosynthesis; pod-2 is required for proper embryonic polarity and for osmotic protection of the eggshell; pod-2 activity is also required for molting. | Paper_evidence | WBPaper00004706 | |||
WBPaper00005095 | |||||||
WBPaper00024324 | |||||||
WBPaper00026763 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 14 Oct 2008 00:00:00 | ||||||
Automated_description | Predicted to enable acetyl-CoA carboxylase activity. Involved in several processes, including establishment or maintenance of epithelial cell apical/basal polarity; nematode larval development; and polarity specification of anterior/posterior axis. Predicted to be located in endoplasmic reticulum membrane and mitochondrion. Expressed in CANL; CANR; and excretory duct. Used to study muscular disease. Is an ortholog of human ACACA (acetyl-CoA carboxylase alpha). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Experimental_model | DOID:0080000 | Homo sapiens | Paper_evidence | WBPaper00061805 | ||
Curator_confirmed | WBPerson324 | ||||||
Date_last_updated | 25 Apr 2022 00:00:00 | ||||||
Models_disease_in_annotation | WBDOannot00001162 | ||||||
Molecular_info | Corresponding_CDS | W09B6.1a | |||||
W09B6.1b | |||||||
W09B6.1c | |||||||
Corresponding_transcript | W09B6.1a.1 | ||||||
W09B6.1a.2 | |||||||
W09B6.1a.3 | |||||||
W09B6.1a.4 | |||||||
W09B6.1b.1 | |||||||
W09B6.1c.1 | |||||||
Other_sequence (71) | |||||||
Associated_feature (18) | |||||||
Experimental_info | RNAi_result (24) | ||||||
Expr_pattern | Chronogram1203 | ||||||
Expr6859 | |||||||
Expr9289 | |||||||
Expr12921 | |||||||
Expr15196 | |||||||
Expr1021344 | |||||||
Expr1031965 | |||||||
Expr1158544 | |||||||
Expr2014988 | |||||||
Expr2033223 | |||||||
Drives_construct | WBCnstr00003313 | ||||||
WBCnstr00013878 | |||||||
WBCnstr00023095 | |||||||
Regulate_expr_cluster | WBPaper00038215:pod-2(RNAi)_regulated | ||||||
Microarray_results (29) | |||||||
Expression_cluster (167) | |||||||
Interaction (107) | |||||||
Map_info | Map | II | Position | -15.5649 | |||
Positive | Positive_clone | W09B6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5516 | |||||
4672 | |||||||
Pseudo_map_position | |||||||
Reference (45) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |