WormBase Tree Display for Gene: WBGene00004076
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| WBGene00004076 | SMap | S_parent | Sequence | W09B6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pod-2 | Person_evidence | WBPerson26 | |||||
| Sequence_name | W09B6.1 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | phi-47 | Person_evidence | WBPerson2582 | ||||||
| CELE_W09B6.1 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | pod-2 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 19 Aug 2005 11:54:06 | WBPerson2970 | Event | Acquires_merge | WBGene00021102 | ||||
| Acquires_merge | WBGene00021102 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pod | ||||||||
| Allele (335) | |||||||||
| Possibly_affected_by | WBVar02153249 | ||||||||
| Strain | WBStrain00008572 | ||||||||
| WBStrain00049317 | |||||||||
| WBStrain00054654 | |||||||||
| WBStrain00054709 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (25) | |||||||||
| Ortholog (46) | |||||||||
| Paralog | WBGene00012131 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00004258 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00009319 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00017864 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | pod-2 encodes an acetyl-CoA carboxylase; by sequence similarity, POD-2 is predicted to catalyze the first step in de novo fatty acid biosynthesis; pod-2 is required for proper embryonic polarity and for osmotic protection of the eggshell; pod-2 activity is also required for molting. | Paper_evidence | WBPaper00004706 | |||||
| WBPaper00005095 | |||||||||
| WBPaper00024324 | |||||||||
| WBPaper00026763 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 14 Oct 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable acetyl-CoA carboxylase activity. Involved in several processes, including establishment or maintenance of epithelial cell apical/basal polarity; nematode larval development; and polarity specification of anterior/posterior axis. Predicted to be located in endoplasmic reticulum membrane and mitochondrion. Expressed in CANL; CANR; and excretory duct. Used to study muscular disease. Is an ortholog of human ACACA (acetyl-CoA carboxylase alpha). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Experimental_model | DOID:0080000 | Homo sapiens | Paper_evidence | WBPaper00061805 | ||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 25 Apr 2022 00:00:00 | ||||||||
| Models_disease_in_annotation | WBDOannot00001162 | ||||||||
| Molecular_info | Corresponding_CDS | W09B6.1a | |||||||
| W09B6.1b | |||||||||
| W09B6.1c | |||||||||
| Corresponding_transcript | W09B6.1a.1 | ||||||||
| W09B6.1a.2 | |||||||||
| W09B6.1a.3 | |||||||||
| W09B6.1a.4 | |||||||||
| W09B6.1b.1 | |||||||||
| W09B6.1c.1 | |||||||||
| Other_sequence | CRC11996_1 | ||||||||
| JI470651.1 | |||||||||
| EX558919.1 | |||||||||
| GP01293 | |||||||||
| SS01024 | |||||||||
| JI476418.1 | |||||||||
| HG10380 | |||||||||
| HC06623 | |||||||||
| FC547782.1 | |||||||||
| FC548749.1 | |||||||||
| JI163955.1 | |||||||||
| Hbac_isotig07173 | |||||||||
| MJ04751 | |||||||||
| BXC03006_1 | |||||||||
| FG972366.1 | |||||||||
| HSC00763_1 | |||||||||
| NBC00980_1 | |||||||||
| SS00956 | |||||||||
| GP03151 | |||||||||
| EX914667.1 | |||||||||
| SSC03044_1 | |||||||||
| TX00102 | |||||||||
| XI05377 | |||||||||
| MA02938 | |||||||||
| GP00769 | |||||||||
| AS00797 | |||||||||
| GP00700 | |||||||||
| HBC10488_1 | |||||||||
| CR10769 | |||||||||
| Hbac_isotig01792 | |||||||||
| MPC00674_1 | |||||||||
| CR12510 | |||||||||
| MP01599 | |||||||||
| AS01688 | |||||||||
| MJ04334 | |||||||||
| JI477884.1 | |||||||||
| CBC08441_1 | |||||||||
| HGC09045_1 | |||||||||
| MC03431 | |||||||||
| MP01074 | |||||||||
| CBC08525_1 | |||||||||
| HO348245.1 | |||||||||
| TCC00868_1 | |||||||||
| XIC03927_1 | |||||||||
| MHC07488_1 | |||||||||
| ASC04747_1 | |||||||||
| MH02292 | |||||||||
| HBC22310_1 | |||||||||
| CRC02706_1 | |||||||||
| ES741385.1 | |||||||||
| CR10533 | |||||||||
| Oden_isotig17181 | |||||||||
| GPC02270_1 | |||||||||
| Oden_isotig27899 | |||||||||
| GPC02411_1 | |||||||||
| GP03056 | |||||||||
| JO468820.1 | |||||||||
| HBC04942_1 | |||||||||
| Acan_isotig07551 | |||||||||
| FG974130.1 | |||||||||
| HCC08320_1 | |||||||||
| Hbac_isotig05030 | |||||||||
| CR12509 | |||||||||
| MJC04290_1 | |||||||||
| NB08614 | |||||||||
| FG972202.1 | |||||||||
| Oden_isotig17182 | |||||||||
| HS00235 | |||||||||
| SSC00490_1 | |||||||||
| ASC16548_1 | |||||||||
| ACC04299_1 | |||||||||
| Associated_feature (18) | |||||||||
| Experimental_info | RNAi_result (24) | ||||||||
| Expr_pattern | Chronogram1203 | ||||||||
| Expr6859 | |||||||||
| Expr9289 | |||||||||
| Expr12921 | |||||||||
| Expr15196 | |||||||||
| Expr1021344 | |||||||||
| Expr1031965 | |||||||||
| Expr1158544 | |||||||||
| Expr2014988 | |||||||||
| Expr2033223 | |||||||||
| Drives_construct | WBCnstr00003313 | ||||||||
| WBCnstr00013878 | |||||||||
| WBCnstr00023095 | |||||||||
| Regulate_expr_cluster | WBPaper00038215:pod-2(RNAi)_regulated | ||||||||
| Microarray_results (29) | |||||||||
| Expression_cluster (167) | |||||||||
| Interaction (107) | |||||||||
| Map_info | Map | II | Position | -15.5649 | |||||
| Positive | Positive_clone | W09B6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5516 | |||||||
| 4672 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (45) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
