WormBase Tree Display for Gene: WBGene00003957

WBGene00003957 SMap: S_parent: Sequence: CHROMOSOME_IV
  Identity: Version: 1
    Name: CGC_name: pcp-2 Person_evidence: WBPerson564
      Sequence_name: F23B2.12
      Molecular_name: F23B2.12
        F23B2.12.1
        CE09592
      Other_name: CELE_F23B2.12 Accession_evidence: NDB BX284604
      Public_name: pcp-2
    DB_info: Database: AceView gene 4J926
        WormQTL gene WBGene00003957
        WormFlux gene WBGene00003957
        NDB locus_tag CELE_F23B2.12
        Panther gene CAEEL|WormBase=WBGene00003957|UniProtKB=G5EFJ8
          family PTHR11010
        NCBI gene 177741
        RefSeq protein NM_069198.6
        TREEFAM TREEFAM_ID TF314855
        TrEMBL UniProtAcc G5EFJ8
        UniProt_GCRP UniProtAcc G5EFJ8
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:33 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pcp
    Allele: WBVar01453598
      WBVar01453599
      WBVar01453600
      WBVar01500079
      WBVar02151071
      WBVar01498996
      WBVar02152017
      WBVar01855523
      WBVar01855524
      WBVar01855525
      WBVar01855526
      WBVar01855527
      WBVar01855528
      WBVar01855529
      WBVar01855530
      WBVar01855531
      WBVar01855532
      WBVar01855533
      WBVar00930484
      WBVar00930485
      WBVar01499228
      WBVar00930486
      WBVar00930487
      WBVar00930488
      WBVar00930489
      WBVar00930490
      WBVar00930491
      WBVar00930492
      WBVar00930493
      WBVar00930494
      WBVar00930495
      WBVar00930496
      WBVar00930497
      WBVar00930498
      WBVar00930499
      WBVar00930500
      WBVar00930501
      WBVar00930502
      WBVar00930503
      WBVar00930504
      WBVar00930505
      WBVar00930506
      WBVar00930507
      WBVar00930508
      WBVar00930509
      WBVar00930510
      WBVar00431711
      WBVar00431712
      WBVar00431713
      WBVar00431714
      WBVar00431715
      WBVar00431716
      WBVar00431717
      WBVar00431718
      WBVar00431719
      WBVar00431720
      WBVar02134384
      WBVar02058342
      WBVar01581696
      WBVar01498928
      WBVar00254657
      WBVar01500245
    In_cluster: conserved_RDE-1_cluster
    RNASeq_FPKM (74)
    GO_annotation: 00018287
      00018288
      00018289
      00018290
      00018291
      00112069
      00112070
    Ortholog (57)
    Paralog: WBGene00003956 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00016134 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00017592 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00022801 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00019682 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00018984 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00017594 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00003958 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00003959 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00044302 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Concise_description: pcp-2 encodes a prolyl carboxypeptidase. Curator_confirmed: WBPerson1843
          Date_last_updated: 14 Oct 2013 00:00:00
      Automated_description: Predicted to enable dipeptidyl-peptidase activity. Predicted to be involved in proteolysis. Located in membrane raft. Is an ortholog of human PRSS16 (serine protease 16). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F23B2.12
    Corresponding_transcript: F23B2.12.1
    Other_sequence (58)
    Associated_feature: WBsf652040
      WBsf718154
      WBsf230520
      WBsf230521
      WBsf230522
  Experimental_info: RNAi_result: WBRNAi00115958 Inferred_automatically: RNAi_primary
      WBRNAi00045388 Inferred_automatically: RNAi_primary
      WBRNAi00089053 Inferred_automatically: RNAi_primary
      WBRNAi00013802 Inferred_automatically: RNAi_primary
      WBRNAi00031310 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1016805
      Expr1149311
      Expr2014784
      Expr2033018
    Drives_construct: WBCnstr00035775
    Construct_product: WBCnstr00035775
    Microarray_results (17)
    Expression_cluster (297)
    Interaction (47)
  Map_info: Map: IV Position: 4.10071 Error: 0.003745
    Positive: Positive_clone: F23B2 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031095
    WBPaper00037777
    WBPaper00038491
    WBPaper00055090
    WBPaper00065759
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene