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WormBase Tree Display for Gene: WBGene00003166

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Name Class

WBGene00003166SMapS_parentSequenceCHROMOSOME_X
IdentityVersion1
NameCGC_namemec-2Person_evidenceWBPerson95
Sequence_nameF14D12.4
Molecular_name (51)
Other_nameCELE_F14D12.4Accession_evidenceNDBBX284606
Public_namemec-2
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:31WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmec
Allele (374)
Legacy_informationSee also e75, e1084, e1514
[C.elegansII] u8amb : touch insensitive; lethargic. ES2. ME?. OA>50: e75 (recessive, ME3), u7cs, e1084 (probable null), e1514, e1608dm, u284sd, etc. Alleles vary in phenotype from weak recessive to strong dominant Mec; complex complementation. Cloned: encodes predicted 440 aa protein with central similarity to human stomatin (65% identity over 247 aa). mec-2:lacZ expressed in cell bodies and processes of touch cells, some other neurons.??? [Chalfie and Au 1989; Huang et al. 1995; TU]
StrainWBStrain00002820
WBStrain00037747
WBStrain00004463
WBStrain00004092
RNASeq_FPKM (74)
GO_annotation (26)
OrthologWBGene00035201Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00035119Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00111326Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WBGene00146602Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00137168Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00051654Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00232993Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g3264Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10021Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g745Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10564Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g2534Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g9087Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g149Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g20189Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g13807Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g17643Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00195.g6737Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_X.g24332Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold626.g6607Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00309.g9166Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00488Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024443Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01262Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g20034Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0237400Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g19092Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00238674Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00110069Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00257700Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00289082Trichuris murisFrom_analysisWormBase-Compara
ZFIN:ZDB-GENE-980526-486Danio rerioFrom_analysisHieranoid
Inparanoid
OrthoFinder
SonicParanoid
ZFIN:ZDB-GENE-050417-366Danio rerioFrom_analysisHieranoid
Inparanoid
OrthoFinder
SonicParanoid
HGNC:3383Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
OrthoFinder
OrthoInspector
MGI:95403Mus musculusFrom_analysisHieranoid
OrthoFinder
OrthoInspector
RGD:1305109Rattus norvegicusFrom_analysisHieranoid
OrthoFinder
OrthoInspector
ParalogWBGene00006761Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006068Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006065Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006741Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006064Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006063Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006067Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006066Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00006061Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionThe mec-2 gene encodes a stomatin homolog required to sense gentle mechanical stimuli (e.g. touch) along the body wall.Paper_evidenceWBPaper00005127
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionEnables cholesterol binding activity. Involved in positive regulation of multicellular organismal process and response to mechanical stimulus. Located in neuron projection membrane. Expressed in sensory neurons. Used to study nephrotic syndrome. Is an ortholog of human STOM (stomatin).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoExperimental_modelDOID:1184Homo sapiensPaper_evidenceWBPaper00044961
Accession_evidenceOMIM600995
Curator_confirmedWBPerson324
Date_last_updated25 Sep 2018 00:00:00
Models_disease_in_annotationWBDOannot00000328
Molecular_infoCorresponding_CDS (17)
Corresponding_transcript (17)
Other_sequence (86)
Associated_feature (17)
Experimental_infoRNAi_resultWBRNAi00027647Inferred_automaticallyRNAi_primary
WBRNAi00013263Inferred_automaticallyRNAi_primary
WBRNAi00044585Inferred_automaticallyRNAi_primary
Expr_pattern (18)
Drives_constructWBCnstr00003347
WBCnstr00004794
WBCnstr00010333
WBCnstr00011303
WBCnstr00011304
WBCnstr00036204
WBCnstr00042668
WBCnstr00042669
Construct_productWBCnstr00010333
WBCnstr00011303
WBCnstr00036204
AntibodyWBAntibody00000792
WBAntibody00000793
WBAntibody00001354
WBAntibody00001686
WBAntibody00002696
Microarray_results (40)
Expression_cluster (164)
Interaction (81)
WBProcessWBbiopr:00000002
Map_info (5)
Reference (113)
RemarkUpdated positive clone to correspond to the sequenced clone instead of just W05G12
MethodGene