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WormBase Tree Display for Gene: WBGene00110069

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Name Class

WBGene00110069SMapS_parentSequencePPA_ChrI
IdentityVersion5
NameSequence_namePPA20515
Molecular_namePPA20515
PPA20515.1
PP53165
Other_nameGENEPREDICTION_SNAP300000079608
GENEPREDICTION_SNAP300000078422
GENEPREDICTION_SNAP300000078423
UMM-S207-7.48Person_evidenceWBPerson606
Public_namePPA20515
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
218 Nov 2010 11:54:48WBPerson2970Name_changeCGC_namePpa-sto-3
324 Nov 2017 09:46:51WBPerson4055EventAcquires_mergeWBGene00111235
424 Nov 2017 09:46:51WBPerson4055EventAcquires_mergeWBGene00111236
520 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameRemoved
Acquires_mergeWBGene00111235
WBGene00111236
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000003215.0515From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001013.94992From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
6.33381From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00182562
00182563
Ortholog (30)
ParalogWBGene00096037Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00106982Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111326Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00116872Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276805Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in plasma membrane. Is an ortholog of C. elegans mec-2. In C. elegans, mec-2 is involved in positive regulation of multicellular organismal process and response to mechanical stimulus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA20515
Corresponding_transcriptPPA20515.1
Other_sequence (54)
Experimental_infoMicroarray_resultsGPL14372_Probes_24446
GPL14372_Probes_24447
GPL14372_Probes_77521
GPL14372_Probes_77522
GPL14372_Probes_77523
GPL14372_Probes_77525
GPL14372_Probes_77526
Expression_clusterWBPaper00041207:PP_dauer_down
Remark[180319 gw3] The CGC name Ppa-sto-3 was deleted as there was no evidence to support it. This name has correctly been assigned to WBGene00276805Curator_confirmedWBPerson4025
MethodGene