WormBase Tree Display for Gene: WBGene00003132
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WBGene00003132 | SMap | S_parent | Sequence | Y110A7A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | mat-1 | Person_evidence | WBPerson205 | |||||
Sequence_name | Y110A7A.17 | ||||||||
Molecular_name | Y110A7A.17a | ||||||||
Y110A7A.17a.1 | |||||||||
CE23241 | |||||||||
Y110A7A.17b | |||||||||
CE53900 | |||||||||
Y110A7A.17b.1 | |||||||||
Other_name | apc-3 | ||||||||
cdc-27 | |||||||||
pod-5 | |||||||||
let-364 | Person_evidence | WBPerson533 | |||||||
CELE_Y110A7A.17 | Accession_evidence | NDB | BX284601 | ||||||
Public_name | mat-1 | ||||||||
DB_info | Database | AceView | gene | 1F692 | |||||
WormQTL | gene | WBGene00003132 | |||||||
WormFlux | gene | WBGene00003132 | |||||||
NDB | locus_tag | CELE_Y110A7A.17 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00003132|UniProtKB=Q9N593 | |||||||
family | PTHR12558 | ||||||||
NCBI | gene | 172145 | |||||||
RefSeq | protein | NM_001377581.3 | |||||||
NM_001026543.8 | |||||||||
SwissProt | UniProtAcc | Q9N593 | |||||||
TREEFAM | TREEFAM_ID | TF101058 | |||||||
UniProt_GCRP | UniProtAcc | Q9N593 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 03 Mar 2015 10:40:40 | WBPerson2970 | Event | Acquires_merge | WBGene00002584 | ||||
Name_change | Other_name | let-364 | |||||||
Acquires_merge | WBGene00002584 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | mat | ||||||||
Allele (48) | |||||||||
Legacy_information | Mutation is defective in metaphase to anaphase transition [Golden A] | ||||||||
[C.elegansII] h104 : sterile adult. NA1. [Howell et al. 1987; KR] | |||||||||
Strain | WBStrain00023696 | ||||||||
WBStrain00006408 | |||||||||
WBStrain00006409 | |||||||||
WBStrain00008574 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (15) | |||||||||
Ortholog (36) | |||||||||
Paralog | WBGene00001281 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00003134 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | mat-1 encodes the C. elegans ortholog of the APC/C (anaphase promoting complex/cyclosome) subunit CDC27/APC3; mat-1 activity is required for progression through the meiotic and mitotic cell cycles; mat-1 and APC/C activity is also required for regulating the abundance of GLR-1 glutamate receptors in the ventral nerve cord. | Paper_evidence | WBPaper00004400 | |||||
WBPaper00005096 | |||||||||
WBPaper00005823 | |||||||||
WBPaper00024611 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 06 May 2009 00:00:00 | ||||||||
Automated_description | Involved in asymmetric cell division; cortical granule exocytosis; and polarity specification of anterior/posterior axis. Predicted to be located in cytoplasm. Predicted to be part of anaphase-promoting complex. Is an ortholog of human CDC27 (cell division cycle 27). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y110A7A.17a | |||||||
Y110A7A.17b | |||||||||
Corresponding_CDS_history | Y110A7A.17:wp126 | ||||||||
Y110A7A.17b:wp274 | |||||||||
Corresponding_transcript | Y110A7A.17a.1 | ||||||||
Y110A7A.17b.1 | |||||||||
Other_sequence (38) | |||||||||
Associated_feature | WBsf649143 | ||||||||
WBsf649144 | |||||||||
WBsf649145 | |||||||||
WBsf664203 | |||||||||
WBsf664204 | |||||||||
WBsf664205 | |||||||||
WBsf664206 | |||||||||
WBsf983603 | |||||||||
WBsf219374 | |||||||||
WBsf219375 | |||||||||
Experimental_info | RNAi_result (24) | ||||||||
Expr_pattern | Expr15733 | ||||||||
Expr1028644 | |||||||||
Expr1031477 | |||||||||
Expr1158858 | |||||||||
Expr2013390 | |||||||||
Expr2031622 | |||||||||
Drives_construct | WBCnstr00036221 | ||||||||
Construct_product | WBCnstr00036221 | ||||||||
WBCnstr00042495 | |||||||||
Microarray_results (23) | |||||||||
Expression_cluster (96) | |||||||||
Interaction (122) | |||||||||
Map_info | Map | I | Position | -0.397417 | Error | 0.005147 | |||
Positive | Positive_clone | Y110A7A | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Negative | Outside_rearr | hDf27 | |||||||
Mapping_data | 2_point | 2531 | |||||||
Multi_point | 3920 | ||||||||
3921 | |||||||||
3922 | |||||||||
4501 | |||||||||
1017 | |||||||||
Pos_neg_data (19) | |||||||||
Reference (44) | |||||||||
Method | Gene |