WormBase Tree Display for Gene: WBGene00003132
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| WBGene00003132 | SMap | S_parent | Sequence | Y110A7A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mat-1 | Person_evidence | WBPerson205 | |||||
| Sequence_name | Y110A7A.17 | ||||||||
| Molecular_name | Y110A7A.17a | ||||||||
| Y110A7A.17a.1 | |||||||||
| CE23241 | |||||||||
| Y110A7A.17b | |||||||||
| CE53900 | |||||||||
| Y110A7A.17b.1 | |||||||||
| Other_name | apc-3 | ||||||||
| cdc-27 | |||||||||
| pod-5 | |||||||||
| let-364 | Person_evidence | WBPerson533 | |||||||
| CELE_Y110A7A.17 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | mat-1 | ||||||||
| DB_info | Database | AceView | gene | 1F692 | |||||
| WormQTL | gene | WBGene00003132 | |||||||
| WormFlux | gene | WBGene00003132 | |||||||
| NDB | locus_tag | CELE_Y110A7A.17 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003132|UniProtKB=Q9N593 | |||||||
| family | PTHR12558 | ||||||||
| NCBI | gene | 172145 | |||||||
| RefSeq | protein | NM_001377581.3 | |||||||
| NM_001026543.8 | |||||||||
| SwissProt | UniProtAcc | Q9N593 | |||||||
| TREEFAM | TREEFAM_ID | TF101058 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N593 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 03 Mar 2015 10:40:40 | WBPerson2970 | Event | Acquires_merge | WBGene00002584 | ||||
| Name_change | Other_name | let-364 | |||||||
| Acquires_merge | WBGene00002584 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mat | ||||||||
| Allele (48) | |||||||||
| Legacy_information | Mutation is defective in metaphase to anaphase transition [Golden A] | ||||||||
| [C.elegansII] h104 : sterile adult. NA1. [Howell et al. 1987; KR] | |||||||||
| Strain | WBStrain00023696 | ||||||||
| WBStrain00006408 | |||||||||
| WBStrain00006409 | |||||||||
| WBStrain00008574 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00001281 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00003134 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | mat-1 encodes the C. elegans ortholog of the APC/C (anaphase promoting complex/cyclosome) subunit CDC27/APC3; mat-1 activity is required for progression through the meiotic and mitotic cell cycles; mat-1 and APC/C activity is also required for regulating the abundance of GLR-1 glutamate receptors in the ventral nerve cord. | Paper_evidence | WBPaper00004400 | |||||
| WBPaper00005096 | |||||||||
| WBPaper00005823 | |||||||||
| WBPaper00024611 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 06 May 2009 00:00:00 | ||||||||
| Automated_description | Involved in asymmetric cell division; cortical granule exocytosis; and polarity specification of anterior/posterior axis. Predicted to be located in cytoplasm. Predicted to be part of anaphase-promoting complex. Is an ortholog of human CDC27 (cell division cycle 27). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y110A7A.17a | |||||||
| Y110A7A.17b | |||||||||
| Corresponding_CDS_history | Y110A7A.17:wp126 | ||||||||
| Y110A7A.17b:wp274 | |||||||||
| Corresponding_transcript | Y110A7A.17a.1 | ||||||||
| Y110A7A.17b.1 | |||||||||
| Other_sequence (38) | |||||||||
| Associated_feature | WBsf649143 | ||||||||
| WBsf649144 | |||||||||
| WBsf649145 | |||||||||
| WBsf664203 | |||||||||
| WBsf664204 | |||||||||
| WBsf664205 | |||||||||
| WBsf664206 | |||||||||
| WBsf983603 | |||||||||
| WBsf219374 | |||||||||
| WBsf219375 | |||||||||
| Experimental_info | RNAi_result (24) | ||||||||
| Expr_pattern | Expr15733 | ||||||||
| Expr1028644 | |||||||||
| Expr1031477 | |||||||||
| Expr1158858 | |||||||||
| Expr2013390 | |||||||||
| Expr2031622 | |||||||||
| Drives_construct | WBCnstr00036221 | ||||||||
| Construct_product | WBCnstr00036221 | ||||||||
| WBCnstr00042495 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (96) | |||||||||
| Interaction (122) | |||||||||
| Map_info | Map | I | Position | -0.397417 | Error | 0.005147 | |||
| Positive | Positive_clone | Y110A7A | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Negative | Outside_rearr | hDf27 | |||||||
| Mapping_data | 2_point | 2531 | |||||||
| Multi_point | 3920 | ||||||||
| 3921 | |||||||||
| 3922 | |||||||||
| 4501 | |||||||||
| 1017 | |||||||||
| Pos_neg_data (19) | |||||||||
| Reference | WBPaper00000975 | ||||||||
| WBPaper00001854 | |||||||||
| WBPaper00003985 | |||||||||
| WBPaper00004400 | |||||||||
| WBPaper00004484 | |||||||||
| WBPaper00005095 | |||||||||
| WBPaper00005565 | |||||||||
| WBPaper00005823 | |||||||||
| WBPaper00006085 | |||||||||
| WBPaper00006435 | |||||||||
| WBPaper00010111 | |||||||||
| WBPaper00010354 | |||||||||
| WBPaper00010486 | |||||||||
| WBPaper00012438 | |||||||||
| WBPaper00012524 | |||||||||
| WBPaper00014207 | |||||||||
| WBPaper00017799 | |||||||||
| WBPaper00017951 | |||||||||
| WBPaper00019724 | |||||||||
| WBPaper00024430 | |||||||||
| WBPaper00024687 | |||||||||
| WBPaper00026970 | |||||||||
| WBPaper00027234 | |||||||||
| WBPaper00027261 | |||||||||
| WBPaper00027274 | |||||||||
| WBPaper00027929 | |||||||||
| WBPaper00028738 | |||||||||
| WBPaper00029199 | |||||||||
| WBPaper00031014 | |||||||||
| WBPaper00031015 | |||||||||
| WBPaper00031865 | |||||||||
| WBPaper00033077 | |||||||||
| WBPaper00033564 | |||||||||
| WBPaper00035426 | |||||||||
| WBPaper00035427 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00039750 | |||||||||
| WBPaper00040157 | |||||||||
| WBPaper00040589 | |||||||||
| WBPaper00052499 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060897 | |||||||||
| WBPaper00062120 | |||||||||
| WBPaper00064339 | |||||||||
| Method | Gene |
