WormBase Tree Display for Gene: WBGene00003132
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WBGene00003132 | SMap | S_parent | Sequence | Y110A7A | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | mat-1 | Person_evidence | WBPerson205 | |||
Sequence_name | Y110A7A.17 | ||||||
Molecular_name | Y110A7A.17a | ||||||
Y110A7A.17a.1 | |||||||
CE23241 | |||||||
Y110A7A.17b | |||||||
CE53900 | |||||||
Y110A7A.17b.1 | |||||||
Other_name | apc-3 | ||||||
cdc-27 | |||||||
pod-5 | |||||||
let-364 | Person_evidence | WBPerson533 | |||||
CELE_Y110A7A.17 | Accession_evidence | NDB | BX284601 | ||||
Public_name | mat-1 | ||||||
DB_info | Database | AceView | gene | 1F692 | |||
WormQTL | gene | WBGene00003132 | |||||
WormFlux | gene | WBGene00003132 | |||||
NDB | locus_tag | CELE_Y110A7A.17 | |||||
Panther | gene | CAEEL|WormBase=WBGene00003132|UniProtKB=Q9N593 | |||||
family | PTHR12558 | ||||||
NCBI | gene | 172145 | |||||
RefSeq | protein | NM_001377581.3 | |||||
NM_001026543.8 | |||||||
SwissProt | UniProtAcc | Q9N593 | |||||
TREEFAM | TREEFAM_ID | TF101058 | |||||
UniProt_GCRP | UniProtAcc | Q9N593 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Acquires_merge | WBGene00002584 | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | mat | ||||||
Allele (48) | |||||||
Legacy_information | Mutation is defective in metaphase to anaphase transition [Golden A] | ||||||
[C.elegansII] h104 : sterile adult. NA1. [Howell et al. 1987; KR] | |||||||
Strain | WBStrain00023696 | ||||||
WBStrain00006408 | |||||||
WBStrain00006409 | |||||||
WBStrain00008574 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (15) | |||||||
Ortholog (36) | |||||||
Paralog | WBGene00001281 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00003134 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
Structured_description | Concise_description | mat-1 encodes the C. elegans ortholog of the APC/C (anaphase promoting complex/cyclosome) subunit CDC27/APC3; mat-1 activity is required for progression through the meiotic and mitotic cell cycles; mat-1 and APC/C activity is also required for regulating the abundance of GLR-1 glutamate receptors in the ventral nerve cord. | Paper_evidence | WBPaper00004400 | |||
WBPaper00005096 | |||||||
WBPaper00005823 | |||||||
WBPaper00024611 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 06 May 2009 00:00:00 | ||||||
Automated_description | Involved in asymmetric cell division; cortical granule exocytosis; and polarity specification of anterior/posterior axis. Predicted to be located in cytoplasm. Predicted to be part of anaphase-promoting complex. Is an ortholog of human CDC27 (cell division cycle 27). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y110A7A.17a | |||||
Y110A7A.17b | |||||||
Corresponding_CDS_history | Y110A7A.17:wp126 | ||||||
Y110A7A.17b:wp274 | |||||||
Corresponding_transcript | Y110A7A.17a.1 | ||||||
Y110A7A.17b.1 | |||||||
Other_sequence (38) | |||||||
Associated_feature | WBsf649143 | ||||||
WBsf649144 | |||||||
WBsf649145 | |||||||
WBsf664203 | |||||||
WBsf664204 | |||||||
WBsf664205 | |||||||
WBsf664206 | |||||||
WBsf983603 | |||||||
WBsf219374 | |||||||
WBsf219375 | |||||||
Experimental_info | RNAi_result (24) | ||||||
Expr_pattern | Expr15733 | ||||||
Expr1028644 | |||||||
Expr1031477 | |||||||
Expr1158858 | |||||||
Expr2013390 | |||||||
Expr2031622 | |||||||
Drives_construct | WBCnstr00036221 | ||||||
Construct_product | WBCnstr00036221 | ||||||
WBCnstr00042495 | |||||||
Microarray_results (23) | |||||||
Expression_cluster (96) | |||||||
Interaction (122) | |||||||
Map_info | Map | I | Position | -0.397417 | Error | 0.005147 | |
Positive | Positive_clone | Y110A7A | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Negative | Outside_rearr | hDf27 | |||||
Mapping_data | 2_point | 2531 | |||||
Multi_point | 3920 | ||||||
3921 | |||||||
3922 | |||||||
4501 | |||||||
1017 | |||||||
Pos_neg_data (19) | |||||||
Reference (44) | |||||||
Method | Gene |