WormBase Tree Display for Gene: WBGene00002062

WBGene00002062 SMap: S_parent: Sequence: C05D9
  Identity: Version: 1
    Name: CGC_name: ife-4 Person_evidence: WBPerson2
      Sequence_name: C05D9.5
      Molecular_name: C05D9.5
        C05D9.5.1
        CE07931
      Other_name: CELE_C05D9.5 Accession_evidence: NDB BX284606
      Public_name: ife-4
    DB_info: Database: AceView gene XB723
        WormQTL gene WBGene00002062
        WormFlux gene WBGene00002062
        NDB locus_tag CELE_C05D9.5
        Panther gene CAEEL|WormBase=WBGene00002062|UniProtKB=Q22888
          family PTHR11960
        NCBI gene 180464
        RefSeq protein NM_075809.5
        SwissProt UniProtAcc Q22888
        TREEFAM TREEFAM_ID TF101529
        UniProt_GCRP UniProtAcc Q22888
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:26 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ife
    Allele (36)
    Legacy_information: [Aamodt EJ] ife for Initiation Factor E family. No mutants known. Predicted gene C05D9.5
    Strain: WBStrain00003351
      WBStrain00024078
      WBStrain00051134
    RNASeq_FPKM (74)
    GO_annotation (15)
    Ortholog (32)
    Paralog: WBGene00002059 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00002060 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00002061 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00002063 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: The ife-4 gene encodes a member of the Initiation Factor 4E (eIF4E) family. Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enables RNA 7-methylguanosine cap binding activity. Predicted to be involved in regulation of translation and translational initiation. Predicted to be part of eukaryotic translation initiation factor 4F complex. Expressed in several structures, including HSN; pharyngeal cell; somatic cell; somatic gonad precursor; and somatic nervous system. Is an ortholog of human EIF4E2 (eukaryotic translation initiation factor 4E family member 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C05D9.5
    Corresponding_transcript: C05D9.5.1
    Other_sequence (44)
    Associated_feature: WBsf647817
      WBsf1003941
      WBsf235309
  Experimental_info: RNAi_result: WBRNAi00093834 Inferred_automatically: RNAi_primary
      WBRNAi00093841 Inferred_automatically: RNAi_primary
      WBRNAi00010215 Inferred_automatically: RNAi_primary
      WBRNAi00093843 Inferred_automatically: RNAi_primary
      WBRNAi00028506 Inferred_automatically: RNAi_primary
      WBRNAi00082161 Inferred_automatically: RNAi_primary
      WBRNAi00039764 Inferred_automatically: RNAi_primary
      WBRNAi00078518 Inferred_automatically: RNAi_primary
      WBRNAi00093840 Inferred_automatically: RNAi_primary
      WBRNAi00093842 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr2328
      Expr3459
      Expr5177
      Expr14696
      Expr1021849
      Expr1031215
      Expr1143851
      Expr2012688
      Expr2030924
    Drives_construct: WBCnstr00000889
      WBCnstr00000890
      WBCnstr00003822
      WBCnstr00036484
    Construct_product: WBCnstr00036484
    Antibody: WBAntibody00000274
      WBAntibody00002950
    Microarray_results (19)
    Expression_cluster (108)
    Interaction (49)
  Map_info: Map: X Position: -18.6013 Error: 0.055519
    Positive: Positive_clone: C05D9 Person_evidence: WBPerson2
          Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4434
    Pseudo_map_position
  Reference (21)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene