WormBase Tree Display for CDS: C05D9.5
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| C05D9.5 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C05D9 | |||
| Structure | Source_exons | 1 | 63 | |||
| 354 | 534 | |||||
| 1017 | 1254 | |||||
| 1673 | 1829 | |||||
| DB_info | Database | SwissProt | UniProtAcc | Q22888 | ||
| UniProt | UniProtAcc | Q22888 | ||||
| UniProt_GCRP | UniProtAcc | Q22888 | ||||
| AlphaFold | entry | Q22888 | ||||
| NCBI_protein | GI_number | GI:373218787 | ||||
| TREEFAM | TREEFAM_ID | TF101529 | ||||
| Protein_id | CHROMOSOME_X | CCD63145 | 1 | |||
| DB_remark | IFE-4 protein; contains similarity to Pfam domain PF01652 (Eukaryotic initiation factor 4E); contains similarity to Interpro domains IPR001040 (Translation Initiation factor eIF- 4e), IPR023398 (Translation Initiation factor eIF- 4e-like) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00002062 | ||||
| Corresponding_transcript | C05D9.5.1 | |||||
| Corresponding_protein | CE07931 | |||||
| Corresponding_PCR_product | cenix:77-g10 | |||||
| mv_C05D9.5 | ||||||
| sjj_C05D9.5 | ||||||
| Corresponding_oligo_set (16) | ||||||
| Matching_cDNA (30) | ||||||
| RNAi_result | WBRNAi00093834 | |||||
| WBRNAi00093841 | ||||||
| WBRNAi00010215 | ||||||
| WBRNAi00093843 | ||||||
| WBRNAi00028506 | ||||||
| WBRNAi00082161 | ||||||
| WBRNAi00039764 | ||||||
| WBRNAi00078518 | ||||||
| WBRNAi00093840 | ||||||
| WBRNAi00093842 | ||||||
| Microarray_results (17) | ||||||
| Brief_identification | Eukaryotic translation initiation factor 4E-4 | Accession_evidence | UniProt | SP:Q22888 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf020348 | |||||
| Method | curated |
