Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00002059

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00002059SMapS_parentSequenceF53A2
IdentityVersion1
NameCGC_nameife-1Person_evidenceWBPerson2
Sequence_nameF53A2.6
Molecular_nameF53A2.6a
F53A2.6a.1
CE16098
F53A2.6b
CE31809
F53A2.6b.1
Other_nameCELE_F53A2.6Accession_evidenceNDBBX284603
Public_nameife-1
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:26WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_info (12)
Disease_infoPotential_modelDOID:12849Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3287)
Molecular_infoCorresponding_CDSF53A2.6a
F53A2.6b
Corresponding_CDS_historyF53A2.6:wp85
Corresponding_transcriptF53A2.6a.1
F53A2.6b.1
Other_sequence (46)
Associated_featureWBsf645703
WBsf645704
WBsf659719
WBsf994861
Experimental_infoRNAi_result (17)
Expr_patternExpr1674
Expr2324
Expr14968
Expr1020608
Expr1031212
Expr1151860
Expr2012685
Expr2030921
Construct_productWBCnstr00021260
Regulate_expr_clusterWBPaper00037963:ife-1(ok1978)_downregulated
AntibodyWBAntibody00000170
Microarray_results (24)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00032425:up_in_lin-35
WBPaper00032528:L3_enriched
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00035211:age-1_vs_N2_downregulated
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:germline-precursors_embryo_enriched
WBPaper00037950:germline-precursors_embryo_SelectivelyEnriched
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
WBPaper00041072:UTX-1_interacting_protein
WBPaper00042477:prp-8(RNAi)_downregulated_RNAseq
WBPaper00043951:insoluble_protein_day16_N2
WBPaper00044616:alg-3-4_upregulated_gene
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00045521:Spermatogenic
WBPaper00045571:germline-ablation_downregulated
WBPaper00045774:clk-1_downregulated
WBPaper00048910:mRNA-interacting_protein
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00050053:muscle_enriched_Day4
WBPaper00050468:hlh-30-dependent_Cry5B_regulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050686:glp-1(e2141)_downregulated
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00051039:germline_enriched
WBPaper00051245:body-wall-muscle_cytoplasm_expressed
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051245:epidermis_nucleus_expressed
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00051245:intestine_nucleus_expressed
WBPaper00051311:VGLN-1-interacting
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053295:lin-22(icb38)_downregulated
WBPaper00053295:lin-22(ot269)_downregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053321:PGCs_enriched_NuGen
WBPaper00053388:dauer_regulated_Cluster6
WBPaper00053599:female_vs_male_downregulated
WBPaper00053599:oocyte_vs_mitosis_upregulated
WBPaper00053713:Pheromone-induced_postdauer_vs_control_downregulated
WBPaper00053810:daf-2(e1370)_downregulated
WBPaper00053810:isp-1(qm150)_downregulated
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00054626:NO_upregulated
WBPaper00055049:S.gordonii_downregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055827:daf-2(e1370)_downregulated
WBPaper00055969:electromagnetic-field_upregulated
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_downregulated_N2
WBPaper00056139:soil-microbiota_downregulated
WBPaper00056161:male_enriched_siRNA
WBPaper00056275:P.aeruginosa_downregulated
WBPaper00056826:SGP_biased
WBPaper00056900:ERH-2_interacting
WBPaper00056900:PID-3_interacting
WBPaper00056900:TOFU-6_interacting
WBPaper00058598:mex-3(eu149)_downregulated
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00059027:neuron-synapses_enriched
WBPaper00060278:atp-2(RNAi)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061340:ADF_AWB
WBPaper00061340:ASE_parent
WBPaper00061340:ASG_AWA
WBPaper00061340:ASI
WBPaper00061340:ASI_parent
WBPaper00061340:ASK_parent
WBPaper00061340:IL1_parent
WBPaper00061340:Neuroblast_ADE_ADA
WBPaper00061340:Neuroblast_HSN_PHB
WBPaper00061340:Neuroblast_URX_CEPDx
WBPaper00061340:OLL_parent
WBPaper00061340:OLQ_parent
WBPaper00061341:28C_24h_downregulated
WBPaper00061341:28C_48h_downregulated
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061478:SUMO-conjugated_protein
WBPaper00061527:T22D1.5-inx-14
WBPaper00061651:Germline_enriched
WBPaper00061651:Sperm_enriched
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00062078:NMR-HspB1_regulated
WBPaper00062123:DEPS-1_interacting
WBPaper00062123:GLH-1_interacting
WBPaper00062143:PQN-59_interacting
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062293:isp-1(qm150)_downregulated
WBPaper00062498:PPM-1.D_interacting
WBPaper00062554:MAGU-2_interacting
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064055:trl-1(cas1077)_downregulated_starved
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064201:SNA-3_interacting
WBPaper00064315:mes-3(bn199)_downregulated_EGCs
WBPaper00064315:mes-4(bn73)_downregulated_EGCs
WBPaper00064716:paraquat_upregulated
WBPaper00064750:0.1mg-nanoplastics_downregulated_protein
WBPaper00064750:1mg-nanoplastics_downregulated_protein
WBPaper00064750:10mg-nanoplastics_downregulated_protein
WBPaper00064789:Day12_vs_Day1_downregulated_neuron
WBPaper00064992:Capsaicin_downregulated
WBPaper00065086:N2_N.ferruginous_regulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065149:lin-52(n771)_upregulated
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4386_cluster_4_4
cgc4489_group_2
cgc4489_group_25
cgc4489_hermaphrodite_enriched_transcription_factors
WBPaper00025032:cluster_29
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00027758:Group_IV
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00036286:Pattern_H
WBPaper00036375:depleted_in_PVD_OLL
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00040963:TA300_up
WBPaper00041002:HF_3d_2.0mM_Down
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00045673:colistin_downregulated
WBPaper00053236:Starvation_regulated_GR1307
[cgc5767]:cluster_98
[cgc5767]:expression_class_E
[cgc5767]:expression_class_ET
[cgc5767]:expression_class_ET_max(66_min)
[cgc5767]:expression_class_E_pi(PC32)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_ME
[cgc5767]:expression_class_MET
[cgc6390]:intrinsic
[cgc6390]:oogenesis-enriched
Interaction (116)
WBProcessWBbiopr:00000069
Map_infoMapIIIPosition21.2112Error9.8e-05
PositivePositive_cloneF53A2Person_evidenceWBPerson2
Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (35)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene