WormBase Tree Display for Gene: WBGene00001990
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WBGene00001990 | Evidence | CGC_data_submission | |||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | K07A12 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | hot-5 | Person_evidence | WBPerson42 | |||||
Sequence_name | K07A12.6 | ||||||||
Molecular_name | K07A12.6 | ||||||||
K07A12.6.1 | |||||||||
CE11874 | |||||||||
Other_name | CELE_K07A12.6 | Accession_evidence | NDB | BX284601 | |||||
Public_name | hot-5 | ||||||||
DB_info | Database | AceView | gene | 1J260 | |||||
WormQTL | gene | WBGene00001990 | |||||||
WormFlux | gene | WBGene00001990 | |||||||
NDB | locus_tag | CELE_K07A12.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001990|UniProtKB=G5ED79 | |||||||
family | PTHR34722 | ||||||||
NCBI | gene | 172671 | |||||||
RefSeq | protein | NM_059948.6 | |||||||
TREEFAM | TREEFAM_ID | TF315944 | |||||||
TrEMBL | UniProtAcc | G5ED79 | |||||||
UniProt_GCRP | UniProtAcc | G5ED79 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | hot | ||||||||
Allele (41) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00013512 | ||||||||
00013513 | |||||||||
00013514 | |||||||||
00013515 | |||||||||
Ortholog (23) | |||||||||
Paralog | WBGene00001986 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WBGene00001987 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WBGene00001988 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WBGene00001989 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WBGene00003849 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WBGene00020489 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WBGene00044484 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
Structured_description (2) | |||||||||
Molecular_info | Corresponding_CDS | K07A12.6 | |||||||
Corresponding_transcript | K07A12.6.1 | ||||||||
Other_sequence | AF324057 | ||||||||
JI176669.1 | |||||||||
Associated_feature | WBsf649406 | ||||||||
WBsf664589 | |||||||||
WBsf664590 | |||||||||
Experimental_info | RNAi_result | WBRNAi00003951 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00050101 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00033411 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1020399 | ||||||||
Expr1153802 | |||||||||
Expr2012543 | |||||||||
Expr2030782 | |||||||||
Drives_construct | WBCnstr00036536 | ||||||||
Construct_product | WBCnstr00036536 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (153) | |||||||||
Interaction (16) | |||||||||
Map_info | Map | I | Position | 3.01746 | Error | 8.8e-05 | |||
Positive | Positive_clone | K07A12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00004498 | ||||||||
Remark | Sequence connection from [Chou JH, Bargmann CI, Sengupta P] | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |