WormBase Tree Display for Gene: WBGene00001986

WBGene00001986 SMap: S_parent: Sequence: F43D2
  Identity: Version: 1
    Name: CGC_name: hot-1 Person_evidence: WBPerson42
      Sequence_name: F43D2.4
      Molecular_name: F43D2.4a
        F43D2.4a.1
        CE30076
        F43D2.4b
        CE43028
        F43D2.4b.1
      Other_name: CELE_F43D2.4 Accession_evidence: NDB BX284605
      Public_name: hot-1
    DB_info: Database: AceView gene 5P107
        WormQTL gene WBGene00001986
        WormFlux gene WBGene00001986
        NDB locus_tag CELE_F43D2.4
        Panther gene CAEEL|WormBase=WBGene00001986|UniProtKB=G5EF85
          family PTHR34722
        NCBI gene 179966
        RefSeq protein NM_171552.4
            NM_001136425.3
        TREEFAM TREEFAM_ID TF315944
        TrEMBL UniProtAcc B5U8P6
            G5EF85
        UniProt_GCRP UniProtAcc G5EF85
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:26 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hot
    Allele (313)
    RNASeq_FPKM (74)
    GO_annotation: 00006241
      00006242
      00006243
      00006244
    Ortholog (32)
    Paralog: WBGene00003849 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00001989 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00020489 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00001988 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00044484 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00001990 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00001987 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Concise_description: hot-1 encodes a predicted paralog of ODR-2 and contains a Ly-6 domain; may be expressed in neurons. Paper_evidence: WBPaper00004498
          Curator_confirmed: WBPerson48
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be involved in olfactory behavior and response to odorant. Predicted to be located in axon and neuronal cell body. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F43D2.4a
      F43D2.4b
    Corresponding_transcript: F43D2.4a.1
      F43D2.4b.1
    Other_sequence (12)
    Associated_feature (16)
  Experimental_info: RNAi_result: WBRNAi00047186 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1014231
      Expr1031155
      Expr1151046
      Expr2012539
      Expr2030778
    Drives_construct: WBCnstr00036539
    Construct_product: WBCnstr00036539
    Microarray_results (17)
    Expression_cluster (103)
  Map_info: Map: V Position: 6.5541 Error: 0.003732
    Positive: Positive_clone: F43D2 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00004498
  Remark: Sequence connection from [Chou JH, Bargmann CI, Sengupta P]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene