WormBase Tree Display for Gene: WBGene00001986
expand all nodes | collapse all nodes | view schema
WBGene00001986 | SMap | S_parent | Sequence | F43D2 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | hot | ||||||
Allele (313) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00006241 | ||||||
00006242 | |||||||
00006243 | |||||||
00006244 | |||||||
Ortholog (32) | |||||||
Paralog | WBGene00003849 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | |||||||
WBGene00001989 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WBGene00020489 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WBGene00001988 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WBGene00044484 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00001990 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WBGene00001987 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
Structured_description | Concise_description | hot-1 encodes a predicted paralog of ODR-2 and contains a Ly-6 domain; may be expressed in neurons. | Paper_evidence | WBPaper00004498 | |||
Curator_confirmed | WBPerson48 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to be involved in olfactory behavior and response to odorant. Predicted to be located in axon and neuronal cell body. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F43D2.4a | |||||
F43D2.4b | |||||||
Corresponding_transcript | F43D2.4a.1 | ||||||
F43D2.4b.1 | |||||||
Other_sequence (12) | |||||||
Associated_feature (16) | |||||||
Experimental_info | RNAi_result | WBRNAi00047186 | Inferred_automatically | RNAi_primary | |||
Expr_pattern | Expr1014231 | ||||||
Expr1031155 | |||||||
Expr1151046 | |||||||
Expr2012539 | |||||||
Expr2030778 | |||||||
Drives_construct | WBCnstr00036539 | ||||||
Construct_product | WBCnstr00036539 | ||||||
Microarray_results (17) | |||||||
Expression_cluster (103) | |||||||
Map_info | Map | V | Position | 6.5541 | Error | 0.003732 | |
Positive | Positive_clone | F43D2 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00004498 | ||||||
Remark | Sequence connection from [Chou JH, Bargmann CI, Sengupta P] | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |