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WormBase Tree Display for Gene: WBGene00001633

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Name Class

WBGene00001633SMapS_parentSequenceY66A7AR
IdentityVersion1
NameCGC_namegly-8Person_evidenceWBPerson228
Sequence_nameY66A7A.6
Molecular_nameY66A7A.6
Y66A7A.6.1
CE15691
Other_nameCELE_Y66A7A.6Accession_evidenceNDBBX284603
Public_namegly-8
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:25WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgly
AlleleWBVar00180213
WBVar02132799
WBVar01995962
WBVar00863767
WBVar00863768
WBVar00863769
WBVar01852365
WBVar00863770
WBVar00863771
WBVar00863772
WBVar00863773
WBVar02057321
WBVar00863774
WBVar00863775
WBVar00863776
WBVar00863777
WBVar00863778
WBVar00863779
WBVar00863780
WBVar01702258
WBVar00863781
WBVar00863782
WBVar00863783
WBVar00863784
WBVar00863785
WBVar00863786
WBVar00863787
WBVar00863788
WBVar00863789
WBVar01567767
WBVar01567768
WBVar00863790
WBVar00863791
WBVar00863792
WBVar00863793
WBVar00863794
WBVar01723946
WBVar02013200
WBVar01499774
WBVar01646567
WBVar01646568
WBVar01646569
WBVar01646570
WBVar01646571
WBVar01270356
WBVar00262861
WBVar01646572
WBVar01646573
WBVar01270357
WBVar01646574
WBVar00262864
WBVar00254031
WBVar00262867
WBVar00250171
WBVar01416634
WBVar01499811
WBVar00409828
WBVar00409829
WBVar00409830
WBVar00409831
WBVar00409832
WBVar00409833
WBVar00409834
WBVar00409835
WBVar00409836
WBVar00409837
WBVar00409838
WBVar00409839
WBVar01919353
RNASeq_FPKM (74)
GO_annotation (12)
Ortholog (36)
ParalogWBGene00001628Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001629Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001630Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001631Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001632Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001635Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001636Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012934Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptiongly-8 encodes a predicted transmembrane polypeptide N-acetylgalactosaminyl transferase (ppGaNTase) similar to the essential Drosophila ppGaNTase encoded by Pgant35A; by homology, GLY-8 is predicted to function as a Golgi enzyme that catalyzes transfer of N-acetylgalactosamine to serine and threonine-containing acceptor peptides, thus initiating mucin-type O-glycosylation; as loss of gly-8 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of GLY-8 in C. elegans development and/or behavior is not yet known.Paper_evidenceWBPaper00003042
WBPaper00005408
Curator_confirmedWBPerson1843
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable Notch binding activity and polypeptide N-acetylgalactosaminyltransferase activity. Predicted to be involved in protein O-linked glycosylation and regulation of Notch signaling pathway. Predicted to be located in Golgi apparatus. Is an ortholog of human GALNT11 (polypeptide N-acetylgalactosaminyltransferase 11) and GALNTL5 (polypeptide N-acetylgalactosaminyltransferase like 5).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY66A7A.6
Corresponding_transcriptY66A7A.6.1
Other_sequence (40)
Associated_featureWBsf645629
WBsf994445
WBsf994446
WBsf1016044
Experimental_infoRNAi_resultWBRNAi00057927Inferred_automaticallyRNAi_primary
WBRNAi00021252Inferred_automaticallyRNAi_primary
WBRNAi00011727Inferred_automaticallyRNAi_primary
WBRNAi00037715Inferred_automaticallyRNAi_primary
WBRNAi00006034Inferred_automaticallyRNAi_primary
Expr_patternExpr1014644
Expr1030980
Expr1161357
Expr2012148
Expr2030384
Drives_constructWBCnstr00036809
Construct_productWBCnstr00036809
Microarray_results (22)
Expression_cluster (274)
Interaction (16)
Map_infoMapIIIPosition11.4318Error0.065596
PositivePositive_cloneY66A7AInferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point5114
4239
Pseudo_map_position
ReferenceWBPaper00003042
WBPaper00005408
WBPaper00017620
WBPaper00026630
WBPaper00029024
WBPaper00038491
WBPaper00055090
WBPaper00061547
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene