WormBase Tree Display for Gene: WBGene00001636
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| WBGene00001636 | SMap | S_parent | Sequence | Y75B8A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | gly-11 | Person_evidence | WBPerson228 | |||||
| Sequence_name | Y75B8A.9 | ||||||||
| Molecular_name | Y75B8A.9a | ||||||||
| Y75B8A.9a.1 | |||||||||
| CE23021 | |||||||||
| Y75B8A.9b | |||||||||
| CE35810 | |||||||||
| Y75B8A.9b.1 | |||||||||
| Other_name | tag-240 | Person_evidence | WBPerson201 | ||||||
| CELE_Y75B8A.9 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | gly-11 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 27 Sep 2005 16:25:55 | WBPerson2970 | Event | Acquires_merge | WBGene00013546 | ||||
| Name_change | CGC_name | gly-11 | |||||||
| 3 | 29 Jun 2006 15:11:32 | WBPerson2970 | Event | Acquires_merge | WBGene00044060 | ||||
| Name_change | Other_name | tag-240 | |||||||
| Acquires_merge | WBGene00013546 | ||||||||
| WBGene00044060 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gly | ||||||||
| Allele (145) | |||||||||
| Strain | WBStrain00001579 | ||||||||
| WBStrain00036033 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00001628 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00001629 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00001630 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00001631 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00001632 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001633 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00001635 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00012934 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable Notch binding activity and polypeptide N-acetylgalactosaminyltransferase activity. Predicted to be involved in protein O-linked glycosylation and regulation of Notch signaling pathway. Predicted to be located in Golgi apparatus. Expressed in excretory cell; hypodermis; and pharyngeal cell. Is an ortholog of human GALNT11 (polypeptide N-acetylgalactosaminyltransferase 11). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y75B8A.9a | |||||||
| Y75B8A.9b | |||||||||
| Corresponding_transcript | Y75B8A.9a.1 | ||||||||
| Y75B8A.9b.1 | |||||||||
| Other_sequence (35) | |||||||||
| Associated_feature | WBsf667502 | ||||||||
| WBsf667503 | |||||||||
| WBsf994594 | |||||||||
| WBsf994595 | |||||||||
| WBsf227641 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00092911 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00006810 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037856 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00058475 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1058 | ||||||||
| Expr11324 | |||||||||
| Expr1024322 | |||||||||
| Expr1030982 | |||||||||
| Expr1161891 | |||||||||
| Expr2012133 | |||||||||
| Expr2030369 | |||||||||
| Drives_construct | WBCnstr00002419 | ||||||||
| WBCnstr00008838 | |||||||||
| WBCnstr00018774 | |||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (115) | |||||||||
| Interaction | WBInteraction000341738 | ||||||||
| WBInteraction000551172 | |||||||||
| WBInteraction000551173 | |||||||||
| WBInteraction000551174 | |||||||||
| WBInteraction000571042 | |||||||||
| Map_info | Map | III | Position | 15.3965 | Error | 0.339739 | |||
| Positive | Positive_clone | Y75B8A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00017620 | ||||||||
| WBPaper00026630 | |||||||||
| WBPaper00029024 | |||||||||
| WBPaper00032108 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059901 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
