WormBase Tree Display for Gene: WBGene00001553
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| WBGene00001553 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | gcy-33 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F57F5.2 | ||||||||
| Molecular_name | F57F5.2a | ||||||||
| F57F5.2a.1 | |||||||||
| CE34891 | |||||||||
| F57F5.2b | |||||||||
| CE45798 | |||||||||
| F57F5.2c | |||||||||
| CE20887 | |||||||||
| F57F5.2b.1 | |||||||||
| F57F5.2c.1 | |||||||||
| Other_name | CeGC4 | Paper_evidence | WBPaper00003629 | ||||||
| CELE_F57F5.2 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | gcy-33 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gcy | ||||||||
| Allele (70) | |||||||||
| Legacy_information | [Yu S] gcy for Guanylyl CYclase. No mutations known. gcy-33::GFP expressed in sensory neuron BAG. Predicted gene F57F5.2 | ||||||||
| Strain | WBStrain00040612 | ||||||||
| WBStrain00005388 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (30) | |||||||||
| Ortholog (48) | |||||||||
| Paralog (36) | |||||||||
| Structured_description | Concise_description | gcy-33 encodes a soluble guanylate cyclase beta subunit; GCY-33 activity is required in the ciliated BAG head sensory neurons to sense decreases in O2 levels and effect corresponding behavioral changes; a gcy-33::GFP reporter is expressed in the BAG neurons; biochemical characterization of chimeric molecules containing the GCY-33 N-terminal H-NOX domain fused to the rat beta1 guanylate cyclase indicate that the GCY-33 H-NOX domain can form complexes with NO, CO, and O2 and that binding can positively regulate catalytic activity of the molecule. | Paper_evidence | WBPaper00002839 | |||||
| WBPaper00002846 | |||||||||
| WBPaper00033008 | |||||||||
| WBPaper00038328 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 24 Aug 2011 00:00:00 | ||||||||
| Automated_description | Enables carbon monoxide sensor activity; nitric oxide binding activity; and oxygen sensor activity. Involved in chemosensory behavior; response to oxygen levels; and sensory perception of bitter taste. Predicted to be located in cytoplasm. Predicted to be part of guanylate cyclase complex, soluble. Expressed in oxygen sensory neurons. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F57F5.2a | |||||||
| F57F5.2b | |||||||||
| F57F5.2c | |||||||||
| Corresponding_CDS_history | F57F5.2:wp106 | ||||||||
| Corresponding_transcript | F57F5.2a.1 | ||||||||
| F57F5.2b.1 | |||||||||
| F57F5.2c.1 | |||||||||
| Associated_feature | WBsf653177 | ||||||||
| WBsf669442 | |||||||||
| WBsf982009 | |||||||||
| WBsf1001500 | |||||||||
| WBsf1020525 | |||||||||
| WBsf234607 | |||||||||
| WBsf234608 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00033041 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048884 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00082700 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015898 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00082390 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr237 | ||||||||
| Expr11512 | |||||||||
| Expr12107 | |||||||||
| Expr13051 | |||||||||
| Expr1024799 | |||||||||
| Expr1030927 | |||||||||
| Expr1152629 | |||||||||
| Expr2011994 | |||||||||
| Expr2030231 | |||||||||
| Drives_construct (11) | |||||||||
| Construct_product | WBCnstr00019054 | ||||||||
| WBCnstr00036867 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (118) | |||||||||
| Interaction (15) | |||||||||
| WBProcess | WBbiopr:00000118 | ||||||||
| Map_info | Map | V | Position | 3.57195 | Error | 0.001108 | |||
| Positive | Positive_clone | F57F5 | Person_evidence | WBPerson4049 | |||||
| Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
| Mapping_data | Multi_point | 4340 | |||||||
| Pseudo_map_position | |||||||||
| Reference (34) | |||||||||
| Remark | Data extracted from Yu et al. (1997) | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
