WormBase Tree Display for Gene: WBGene00001553
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WBGene00001553 | SMap | S_parent | Sequence | CHROMOSOME_V | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | gcy | ||||||
Allele (70) | |||||||
Legacy_information | [Yu S] gcy for Guanylyl CYclase. No mutations known. gcy-33::GFP expressed in sensory neuron BAG. Predicted gene F57F5.2 | ||||||
Strain | WBStrain00040612 | ||||||
WBStrain00005388 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (30) | |||||||
Ortholog (48) | |||||||
Paralog (36) | |||||||
Structured_description | Concise_description | gcy-33 encodes a soluble guanylate cyclase beta subunit; GCY-33 activity is required in the ciliated BAG head sensory neurons to sense decreases in O2 levels and effect corresponding behavioral changes; a gcy-33::GFP reporter is expressed in the BAG neurons; biochemical characterization of chimeric molecules containing the GCY-33 N-terminal H-NOX domain fused to the rat beta1 guanylate cyclase indicate that the GCY-33 H-NOX domain can form complexes with NO, CO, and O2 and that binding can positively regulate catalytic activity of the molecule. | Paper_evidence | WBPaper00002839 | |||
WBPaper00002846 | |||||||
WBPaper00033008 | |||||||
WBPaper00038328 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 24 Aug 2011 00:00:00 | ||||||
Automated_description | Enables carbon monoxide sensor activity; nitric oxide binding activity; and oxygen sensor activity. Involved in chemosensory behavior; response to oxygen levels; and sensory perception of bitter taste. Predicted to be located in cytoplasm. Predicted to be part of guanylate cyclase complex, soluble. Expressed in oxygen sensory neurons. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F57F5.2a | |||||
F57F5.2b | |||||||
F57F5.2c | |||||||
Corresponding_CDS_history | F57F5.2:wp106 | ||||||
Corresponding_transcript | F57F5.2a.1 | ||||||
F57F5.2b.1 | |||||||
F57F5.2c.1 | |||||||
Associated_feature | WBsf653177 | ||||||
WBsf669442 | |||||||
WBsf982009 | |||||||
WBsf1001500 | |||||||
WBsf1020525 | |||||||
WBsf234607 | |||||||
WBsf234608 | |||||||
Experimental_info | RNAi_result | WBRNAi00033041 | Inferred_automatically | RNAi_primary | |||
WBRNAi00048884 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00082700 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00015898 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00082390 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr237 | ||||||
Expr11512 | |||||||
Expr12107 | |||||||
Expr13051 | |||||||
Expr1024799 | |||||||
Expr1030927 | |||||||
Expr1152629 | |||||||
Expr2011994 | |||||||
Expr2030231 | |||||||
Drives_construct (11) | |||||||
Construct_product | WBCnstr00019054 | ||||||
WBCnstr00036867 | |||||||
Microarray_results (22) | |||||||
Expression_cluster (118) | |||||||
Interaction (15) | |||||||
WBProcess | WBbiopr:00000118 | ||||||
Map_info | Map | V | Position | 3.57195 | Error | 0.001108 | |
Positive | Positive_clone | F57F5 | Person_evidence | WBPerson4049 | |||
Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
Mapping_data | Multi_point | 4340 | |||||
Pseudo_map_position | |||||||
Reference (34) | |||||||
Remark | Data extracted from Yu et al. (1997) | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |