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WormBase Tree Display for Gene: WBGene00001311

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Name Class

WBGene00001311SMapS_parentSequenceF58E10
IdentityVersion1
NameCGC_nameend-3Person_evidenceWBPerson539
Sequence_nameF58E10.5
Molecular_nameF58E10.5
F58E10.5.1
CE18787
Other_nameCELE_F58E10.5Accession_evidenceNDBBX284605
Public_nameend-3
DB_infoDatabaseAceViewgene5O495
WormQTLgeneWBGene00001311
SignaLinkproteinWBGene00001311
WormFluxgeneWBGene00001311
NDBlocus_tagCELE_F58E10.5
PanthergeneCAEEL|WormBase=WBGene00001311|UniProtKB=Q9XUW7
familyPTHR10071
NCBIgene191631
RefSeqproteinNM_074079.3
TrEMBLUniProtAccQ9XUW7
UniProt_GCRPUniProtAccQ9XUW7
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:24WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classend
Allele (22)
StrainWBStrain00022758
WBStrain00022759
WBStrain00022761
WBStrain00032030
WBStrain00051975
RNASeq_FPKM (74)
GO_annotation (23)
Ortholog (34)
ParalogWBGene00001186Caenorhabditis elegansFrom_analysisPanther
WBGene00001249Caenorhabditis elegansFrom_analysisPanther
WBGene00001250Caenorhabditis elegansFrom_analysisPanther
WBGene00001251Caenorhabditis elegansFrom_analysisPanther
WBGene00001252Caenorhabditis elegansFrom_analysisPanther
WBGene00001253Caenorhabditis elegansFrom_analysisPanther
WBGene00001310Caenorhabditis elegansFrom_analysisPanther
WBGene00015981Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionConcise_descriptionend-3 encodes a GATA-type transcription factor paralogous to end-1; during early embryonic development, end-3 functions redundnatly with end-1 to specify endodermal fate; like end-1, ectopic expression of end-3 is sufficient to specify endodermal fate; end-3 is expressed in the early E (endoderm) lineage; end-3 expression is downstream of med-1, a mesendodermal specification gene.Paper_evidenceWBPaper00004636
WBPaper00005295
WBPaper00005341
WBPaper00026622
Curator_confirmedWBPerson1843
WBPerson567
Date_last_updated26 Jan 2012 00:00:00
Automated_descriptionPredicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in endodermal cell fate specification and mesodermal cell fate specification. Located in nucleus. Expressed in E; E lineage cell; Ea; Ep; and intestine.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF58E10.5
Corresponding_transcriptF58E10.5.1
Associated_featureWBsf647507
WBsf662064
WBsf978293
WBsf232858
Transcription_factorWBTranscriptionFactor000711
Experimental_infoRNAi_result (11)
Expr_pattern (14)
Drives_constructWBCnstr00004612
WBCnstr00005054
WBCnstr00005055
WBCnstr00005056
WBCnstr00006158
WBCnstr00007189
WBCnstr00011436
WBCnstr00015236
WBCnstr00019641
WBCnstr00037000
Construct_product (12)
Microarray_results (21)
Expression_cluster (83)
Interaction (121)
Map_infoMapVPosition5.98767Error0.022085
PositivePositive_cloneF58E10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4149
4288
4500
Pseudo_map_position
ReferenceWBPaper00003170
WBPaper00003328
WBPaper00004550
WBPaper00004964
WBPaper00005042
WBPaper00005237
WBPaper00005295
WBPaper00005341
WBPaper00006181
WBPaper00006196
WBPaper00006366
WBPaper00006419
WBPaper00006462
WBPaper00006475
WBPaper00010656
WBPaper00015665
WBPaper00015711
WBPaper00015799
WBPaper00016673
WBPaper00016786
WBPaper00016941
WBPaper00017018
WBPaper00017086
WBPaper00017344
WBPaper00017355
WBPaper00017532
WBPaper00017573
WBPaper00017576
WBPaper00017885
WBPaper00018114
WBPaper00023408
WBPaper00023477
WBPaper00023771
WBPaper00023783
WBPaper00023799
WBPaper00024010
WBPaper00024011
WBPaper00025032
WBPaper00026251
WBPaper00026277
WBPaper00026581
WBPaper00026622
WBPaper00026704
WBPaper00026730
WBPaper00026980
WBPaper00027309
WBPaper00027318
WBPaper00028492
WBPaper00028736
WBPaper00031196
WBPaper00031983
WBPaper00032062
WBPaper00032287
WBPaper00032951
WBPaper00033504
WBPaper00034254
WBPaper00034257
WBPaper00034275
WBPaper00034782
WBPaper00035036
WBPaper00035290
WBPaper00035964
WBPaper00036787
WBPaper00036961
WBPaper00037112
WBPaper00037924
WBPaper00038341
WBPaper00038660
WBPaper00039442
WBPaper00039476
WBPaper00039487
WBPaper00039735
WBPaper00040108
WBPaper00042534
WBPaper00042608
WBPaper00042960
WBPaper00043584
WBPaper00043714
WBPaper00045713
WBPaper00046779
WBPaper00047164
WBPaper00047169
WBPaper00048374
WBPaper00049038
WBPaper00050204
WBPaper00051237
WBPaper00052122
WBPaper00052132
WBPaper00052300
WBPaper00052383
WBPaper00052392
WBPaper00053579
WBPaper00053902
WBPaper00057865
WBPaper00057963
WBPaper00058664
WBPaper00059200
WBPaper00061080
WBPaper00061738
WBPaper00063197
WBPaper00063207
WBPaper00064208
WBPaper00064558
PictureWBPicture0000013084
RemarkSequence data from Morris Maduro
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene