WormBase Tree Display for Gene: WBGene00001105
expand all nodes | collapse all nodes | view schema
WBGene00001105 | SMap | S_parent | Sequence | Y41D4B | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name (5) | |||||||||
DB_info | Database | AceView | gene | 4C377 | |||||
WormQTL | gene | WBGene00001105 | |||||||
WormFlux | gene | WBGene00001105 | |||||||
NDB | locus_tag | CELE_Y41D4B.10 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001105|UniProtKB=Q95Y10 | |||||||
family | PTHR22669 | ||||||||
NCBI | gene | 176970 | |||||||
RefSeq | protein | NM_001380053.1 | |||||||
NM_067707.5 | |||||||||
TrEMBL | UniProtAcc | U4PBR7 | |||||||
Q95Y10 | |||||||||
UniProt_GCRP | UniProtAcc | Q95Y10 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | dsl | ||||||||
Allele (96) | |||||||||
Strain | WBStrain00033146 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00089524 | ||||||||
00089525 | |||||||||
00089526 | |||||||||
00108263 | |||||||||
00108264 | |||||||||
00108265 | |||||||||
00108266 | |||||||||
00108267 | |||||||||
Ortholog (25) | |||||||||
Paralog | WBGene00001103 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001104 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00002246 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00001107 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001108 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001109 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00021525 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00021513 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | dsl-3 encodes a putative secreted protein with single DSL and EGF domainsin series, somewhat like Delta/LAG-2; DSL-3 belongs to a nematode-specificfamily of Delta/LAG-2-like proteins that includes DSL-1, -2, -3, -5, -6,and -7. | Paper_evidence | WBPaper00006450 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 04 Apr 2008 00:00:00 | ||||||||
Automated_description | Predicted to enable Notch binding activity. Predicted to be involved in cell fate specification. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y41D4B.10a | |||||||
Y41D4B.10b | |||||||||
Corresponding_transcript | Y41D4B.10a.1 | ||||||||
Y41D4B.10b.1 | |||||||||
Other_sequence | CJC00218_1 | ||||||||
CBC14972_1 | |||||||||
CRC04777_1 | |||||||||
CR03312 | |||||||||
Associated_feature | WBsf645803 | ||||||||
WBsf645804 | |||||||||
WBsf995494 | |||||||||
WBsf227962 | |||||||||
Experimental_info | RNAi_result | WBRNAi00081020 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00081002 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00063601 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00020476 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00056377 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00081001 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00067809 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00063608 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00081019 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr2846 | ||||||||
Expr1023860 | |||||||||
Expr1030705 | |||||||||
Expr1159864 | |||||||||
Expr2011107 | |||||||||
Expr2029343 | |||||||||
Drives_construct | WBCnstr00010981 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (190) | |||||||||
Interaction | WBInteraction000007263 | ||||||||
WBInteraction000051472 | |||||||||
WBInteraction000051473 | |||||||||
WBInteraction000051490 | |||||||||
WBInteraction000051491 | |||||||||
WBInteraction000569675 | |||||||||
Map_info | Map | IV | Position | -16.5057 | Error | 0.022376 | |||
Positive | Positive_clone | Y41D4B | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00006450 | ||||||||
WBPaper00026373 | |||||||||
WBPaper00034675 | |||||||||
WBPaper00040714 | |||||||||
WBPaper00043433 | |||||||||
WBPaper00053579 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |