WormBase Tree Display for Gene: WBGene00001085
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| WBGene00001085 | SMap | S_parent | Sequence | C25G4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | dpy-26 | Person_evidence | WBPerson261 | |||||
| Sequence_name | C25G4.5 | ||||||||
| Molecular_name | C25G4.5 | ||||||||
| C25G4.5.1 | |||||||||
| CE08398 | |||||||||
| Other_name | CELE_C25G4.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | dpy-26 | ||||||||
| DB_info | Database | AceView | gene | 4N212 | |||||
| WormQTL | gene | WBGene00001085 | |||||||
| WormFlux | gene | WBGene00001085 | |||||||
| NDB | locus_tag | CELE_C25G4.5 | |||||||
| NCBI | gene | 178196 | |||||||
| RefSeq | protein | NM_069977.9 | |||||||
| SwissProt | UniProtAcc | G5EGE9 | |||||||
| TREEFAM | TREEFAM_ID | TF317844 | |||||||
| UniProt_GCRP | UniProtAcc | G5EGE9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dpy | ||||||||
| Reference_allele | WBVar00089317 | ||||||||
| Allele (97) | |||||||||
| Legacy_information | n199mat : XX daughters of n199/+ mothers are maternally rescued weak dumpy phenotype with protruding vulva (ES2) 4% Him; XX daughters of n199/n199 mothers are severely dumpy and Him (2% of brood) or die as embryos or young larvae (98% of XX brood). XO n199 animals are non-dumpy almost wildtype males (ME3). Similar or slightly stronger phenotypes in n199/Df. NA3 (n198 (resembles n199) y6 (weaker phenotypes). | ||||||||
| See also n198, n199, y6 | |||||||||
| [C.elegansII] n199mat : XX daughters of n199/+ mothers are maternally rescued weak dumpy phenotype with protruding vulva (ES2) 4% Him; XX daughters of n199/n199 mothers are severely dumpy and Him (2% of brood) or die as embryos or young larvae (98% of XX brood). XO n199 animals are non-dumpy almost wildtype males (ME3). Similar or slightly stronger phenotypes in n199/Df. OA3: n198 (resembles n199), y6 (weaker phenotypes), y65. Cloned: encodes predicted 1263 aa novel protein; antibody staining indicates DPY-26 associated with X chromosomes in XX, diffuse nuclear in XO. [Plenefisch et al. 1989; TY] | |||||||||
| Strain | WBStrain00004455 | ||||||||
| WBStrain00004613 | |||||||||
| WBStrain00004619 | |||||||||
| WBStrain00004623 | |||||||||
| WBStrain00034748 | |||||||||
| WBStrain00054695 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Contained_in_operon | CEOP4516 | ||||||||
| Ortholog (18) | |||||||||
| Structured_description | Concise_description | dpy-26 encodes a novel, acidic protein that is highly conserved in other Caenorhabditis species; during development, dpy-26 activity is required for both dosage compensation and meiotic chromosome segregation; DPY-26 localizes to all meiotic chromosomes in the germline and to the hermaphrodite X chromosomes in somatic cells; SDC-1, SDC-2, and SDC-3 proteins form a complex and these three proteins, in turn, colocalize with DPY-26, DPY-27, and MIX-1 proteins both on the X chromosome and on a transgenic her-1(+) array. | Paper_evidence | WBPaper00002605 | |||||
| WBPaper00002606 | |||||||||
| WBPaper00005215 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 21 May 2007 00:00:00 | ||||||||
| Automated_description | Involved in dosage compensation by hypoactivation of X chromosome; meiotic sister chromatid segregation; and mitotic sister chromatid segregation. Located in condensed nuclear chromosome. Part of dosage compensation complex. Expressed widely. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C25G4.5 | |||||||
| Corresponding_transcript | C25G4.5.1 | ||||||||
| Other_sequence | U43562 | ||||||||
| CBC04037_1 | |||||||||
| CR05839 | |||||||||
| CRC11903_1 | |||||||||
| PPC12755_1 | |||||||||
| CBC13777_1 | |||||||||
| CBC01161_1 | |||||||||
| CRC07128_1 | |||||||||
| Associated_feature | WBsf652298 | ||||||||
| WBsf668431 | |||||||||
| WBsf231021 | |||||||||
| WBsf231022 | |||||||||
| WBsf231023 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00041214 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011181 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00080293 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00080269 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00080286 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00080273 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00080282 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1570 | ||||||||
| Expr9851 | |||||||||
| Expr1022687 | |||||||||
| Expr1030690 | |||||||||
| Expr1145250 | |||||||||
| Expr1200198 | |||||||||
| Expr2011067 | |||||||||
| Expr2029304 | |||||||||
| Drives_construct | WBCnstr00037090 | ||||||||
| Construct_product | WBCnstr00037090 | ||||||||
| Antibody | WBAntibody00000131 | ||||||||
| WBAntibody00000807 | |||||||||
| WBAntibody00000808 | |||||||||
| WBAntibody00001591 | |||||||||
| WBAntibody00001964 | |||||||||
| WBAntibody00002034 | |||||||||
| WBAntibody00002040 | |||||||||
| WBAntibody00002734 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (104) | |||||||||
| Interaction | WBInteraction000000005 | ||||||||
| WBInteraction000000137 | |||||||||
| WBInteraction000000413 | |||||||||
| WBInteraction000000446 | |||||||||
| WBInteraction000002540 | |||||||||
| WBInteraction000002541 | |||||||||
| WBInteraction000003068 | |||||||||
| WBInteraction000003108 | |||||||||
| WBInteraction000004502 | |||||||||
| WBInteraction000005629 | |||||||||
| WBInteraction000005630 | |||||||||
| WBInteraction000028498 | |||||||||
| WBInteraction000028750 | |||||||||
| WBInteraction000030355 | |||||||||
| WBInteraction000030367 | |||||||||
| WBInteraction000030368 | |||||||||
| WBInteraction000030369 | |||||||||
| WBInteraction000030370 | |||||||||
| WBInteraction000030371 | |||||||||
| WBInteraction000051397 | |||||||||
| WBInteraction000051401 | |||||||||
| WBInteraction000052069 | |||||||||
| WBInteraction000052289 | |||||||||
| WBInteraction000126127 | |||||||||
| WBInteraction000126128 | |||||||||
| WBInteraction000126423 | |||||||||
| WBInteraction000126828 | |||||||||
| WBInteraction000126829 | |||||||||
| WBInteraction000126913 | |||||||||
| WBInteraction000140918 | |||||||||
| WBInteraction000165694 | |||||||||
| WBInteraction000165695 | |||||||||
| WBInteraction000165696 | |||||||||
| WBInteraction000166355 | |||||||||
| WBInteraction000166460 | |||||||||
| WBInteraction000180405 | |||||||||
| WBInteraction000185230 | |||||||||
| WBInteraction000282725 | |||||||||
| WBInteraction000293590 | |||||||||
| WBInteraction000298963 | |||||||||
| WBInteraction000343839 | |||||||||
| WBInteraction000346671 | |||||||||
| WBInteraction000351166 | |||||||||
| WBInteraction000414805 | |||||||||
| WBInteraction000501496 | |||||||||
| WBInteraction000501665 | |||||||||
| WBInteraction000505163 | |||||||||
| WBInteraction000521298 | |||||||||
| WBInteraction000540688 | |||||||||
| WBInteraction000540708 | |||||||||
| WBInteraction000540709 | |||||||||
| WBInteraction000540710 | |||||||||
| WBInteraction000540711 | |||||||||
| WBInteraction000541075 | |||||||||
| WBInteraction000541507 | |||||||||
| WBInteraction000541508 | |||||||||
| WBInteraction000541631 | |||||||||
| WBInteraction000542964 | |||||||||
| WBInteraction000542968 | |||||||||
| WBInteraction000542980 | |||||||||
| WBInteraction000542981 | |||||||||
| WBInteraction000542983 | |||||||||
| WBInteraction000554829 | |||||||||
| WBInteraction000555985 | |||||||||
| WBInteraction000556021 | |||||||||
| WBInteraction000556022 | |||||||||
| WBInteraction000556023 | |||||||||
| WBInteraction000556026 | |||||||||
| WBInteraction000556314 | |||||||||
| WBInteraction000556315 | |||||||||
| WBInteraction000556316 | |||||||||
| WBInteraction000556317 | |||||||||
| WBInteraction000556559 | |||||||||
| WBInteraction000556563 | |||||||||
| WBInteraction000556575 | |||||||||
| WBInteraction000559087 | |||||||||
| WBInteraction000560769 | |||||||||
| WBInteraction000560772 | |||||||||
| WBInteraction000561380 | |||||||||
| WBInteraction000561382 | |||||||||
| WBInteraction000562855 | |||||||||
| WBInteraction000562856 | |||||||||
| WBInteraction000575070 | |||||||||
| WBInteraction000575870 | |||||||||
| WBInteraction000578866 | |||||||||
| WBInteraction000579967 | |||||||||
| WBProcess | WBbiopr:00000056 | ||||||||
| WBbiopr:00000099 | |||||||||
| Map_info | Map | IV | Position | 5.94177 | Error | 0.00601 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | C25G4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | 2_point | 648 | |||||||
| 819 | |||||||||
| 823 | |||||||||
| 824 | |||||||||
| Multi_point | 568 | ||||||||
| 569 | |||||||||
| 570 | |||||||||
| 764 | |||||||||
| 765 | |||||||||
| 766 | |||||||||
| 767 | |||||||||
| 1916 | |||||||||
| 5281 | |||||||||
| Landmark_gene | |||||||||
| Reference (112) | |||||||||
| Method | Gene |
