Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00000733

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00000733EvidencePerson_evidenceWBPerson345
WBPerson651
SMapS_parentSequenceF57B1
IdentityVersion1
NameCGC_namecol-160Person_evidenceWBPerson345
Sequence_nameF57B1.4
Molecular_nameF57B1.4
F57B1.4.1
CE31962
F57B1.4.2
F57B1.4.3
Other_nameCELE_F57B1.4Accession_evidenceNDBBX284605
Public_namecol-160
DB_infoDatabaseAceViewgene5N682
WormQTLgeneWBGene00000733
WormFluxgeneWBGene00000733
NDBlocus_tagCELE_F57B1.4
PanthergeneCAEEL|WormBase=WBGene00000733|UniProtKB=Q20921
familyPTHR24637
NCBIgene179804
RefSeqproteinNM_001392637.1
TrEMBLUniProtAccQ20921
UniProt_GCRPUniProtAccQ20921
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:21WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcol
Allele (32)
RNASeq_FPKM (74)
GO_annotation00069557
00069558
00069559
00107721
Ortholog (38)
Paralog (161)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF57B1.4
Corresponding_CDS_historyF57B1.4:wp87
Corresponding_transcriptF57B1.4.1
F57B1.4.2
F57B1.4.3
Other_sequence (48)
Associated_featureWBsf653293
WBsf1001754
WBsf1001755
WBsf1020678
WBsf1020679
WBsf1020680
WBsf234782
Experimental_infoRNAi_resultWBRNAi00007343Inferred_automaticallyRNAi_primary
WBRNAi00114422Inferred_automaticallyRNAi_primary
WBRNAi00048809Inferred_automaticallyRNAi_primary
WBRNAi00115946Inferred_automaticallyRNAi_primary
WBRNAi00111005Inferred_automaticallyRNAi_primary
WBRNAi00015870Inferred_automaticallyRNAi_primary
WBRNAi00015869Inferred_automaticallyRNAi_primary
Expr_patternExpr1027398
Expr1030447
Expr1152565
Expr2010355
Expr2028598
Drives_constructWBCnstr00037325
Construct_productWBCnstr00037325
Microarray_results (15)
Expression_clusterWBPaper00028788:No_Response_to_MPK-1
WBPaper00031040:TGF-beta_adult_upregulated
WBPaper00032031:DConiospora_downregulated_OligoArray_24h
WBPaper00032528:L3_enriched
WBPaper00035269:cde-1_regulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_larva_enriched
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:hypodermis_larva_enriched
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00037950:PVD-OLL-neurons_larva_enriched
WBPaper00038168:lin-15B(n744)_downregulated
WBPaper00038237:age-1_upregulated_intestine_rescue
WBPaper00038237:age-1_upregulated_neuron_rescue
WBPaper00038237:age-1_upregulated_nontransgenic
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00042477:rsr-2(RNAi)_upregulated_RNAseq
WBPaper00044578:reduced-humidity_downregulated_microarray
WBPaper00044656:tatn-1(qd182)_upregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00045257:bar-1(ga80)_upregulated
WBPaper00045316:prg-1_upregulated_L1
WBPaper00045401:N.parisii_64h_downregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_upregulated
WBPaper00045774:clk-1_upregulated
WBPaper00045934:wrn-1(gk99)_upregulated
WBPaper00045974:NSM_enriched_totalRNA_RNAseq
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00046795:starvation_downregulated
WBPaper00046858:elt-2(RNAi)_downregulated
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00048611:MnCl2_downregulated
WBPaper00048952:glucose_induced
WBPaper00048988:neuron_expressed
WBPaper00049498:npr-1(ur89)_regulated_6
WBPaper00049635:dop-1(vs100)_downregulated
WBPaper00049905:Age_variant_expression
WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
WBPaper00049920:Glucose-Diet_upregulated_N2
WBPaper00049942:HeatShock_upregulated_hsf-1(+)
WBPaper00050080:rbr-2(tm3141)_downregulated
WBPaper00050096:P.aeruginosa_downregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_100-cell-embryo
WBPaper00050163:chd-3(eh4)_downregulated_24-cell-embryo
WBPaper00050163:chd-3(eh4)_downregulated_100-cell-embryo
WBPaper00050234:lin-28(RNAi)_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050903:mir-35-41(nDf50)_25C_upregulated
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:seam_expressed
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051245:epidermis_specific
WBPaper00051265:F4_morc-1(tm6048)_downregulated
WBPaper00051305:vit-2(ac3)_downregulated
WBPaper00051352:Long-Term-Association-Memory_downregulated
WBPaper00051404:alg-1(gk214)_upregulated
WBPaper00051404:alg-2(ok304)_upregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053295:lin-22(ot269)_downregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053318:Aging_downregulated_mRNA_N2
WBPaper00053318:mir-71(n4115)_downregulated_mRNA
WBPaper00053388:dauer_regulated_Cluster1
WBPaper00053599:female_vs_male_downregulated
WBPaper00053599:oocyte_vs_mitosis_upregulated
WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00053814:15C_downregulated_PY79
WBPaper00054410:set-9(rw5)_upregulated
WBPaper00055013:spt-16(RNAi)_upregulated
WBPaper00055049:S.gordonii_downregulated
WBPaper00055060:flr-1(RNAi)_downregulated
WBPaper00055103:thoc-5(wy822)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055482:Tunicamycin_downregulated
WBPaper00055827:pfd-6(gk493446)_downregulated
WBPaper00055941:nuo-6(qm200)_upregulated
WBPaper00055944:C.butyricum_vs_OP50_downregulated
WBPaper00055969:electromagnetic-field_upregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056039:efa-6(tm3124)_downregulated
WBPaper00056039:ptl-1(ok621)_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_downregulated_N2
WBPaper00056169:rrf-3(pk1426)_upregulated_L3
WBPaper00056169:rrf-3(pk1426)_upregulated_L4
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056290:mdt-15(mg584)_downregulated
WBPaper00056443:DietaryRestriction_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056586:mpk-2(ok219)_upregulated
WBPaper00056868:P.aeruginosa_downregulated_smallRNA
WBPaper00057068:ints-4(RNAi)_upregulated_Cadmium
WBPaper00057068:numr-1(RNAi)_upregulated
WBPaper00057083:daf-2(e1370)rsks-1(ok1255)_post-transcriptional_upregulated
WBPaper00058598:mex-3(eu149)_downregulated
WBPaper00058598:spn-4(tm291)_downregulated
WBPaper00058711:paraquat_upregulated
WBPaper00058711:wdr-5(ok1417)_upregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00058927:high-redox-state_downregulated
WBPaper00058942:henn-1(pk2295)_upregulated
WBPaper00058948:npr-8(ok1439)_downregulated_PA14
WBPaper00058948:PA14_upregulated
WBPaper00058958:100mGy-irradiation-72h_upregulated
WBPaper00058969:RIS_depleted
WBPaper00059194:klf-1(RNAi)_regulated
WBPaper00059231:alh-6(lax105)_D3Adult_upregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059334:sacy-1(depletion)_regulated
WBPaper00059421:daf-1(m40);daf-3(mgDf90)_upregulated
WBPaper00059421:daf-3(mgDf90)_upregulated
WBPaper00059537:ngn-1(ok2200)_upregulated
WBPaper00059566:wdr-23(mac32)_upregulated
WBPaper00059605:mut-16(pk710)_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059735:glucose_upregulated_lpin-1(RNAi)
WBPaper00059763:neuron_acr-2(n2420gf)_regulated
WBPaper00059763:neuron_expressed
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00059895:wounding_downregulated
WBPaper00060084:cco-1(RNAi)_upregulated_lin-40(yth27)
WBPaper00060224:atf-6(ok551)_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060434:pH4.33_vs_pH6.33_uprgulated
WBPaper00060703:nas-38(ok3407)_downregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060911:prx-5(RNAi)_downregulated_mRNA
WBPaper00060921:cat-2(e1112)_downregulated
WBPaper00060921:tdc-1(n3419)_downregulated
WBPaper00061040:FW1256_upregulated
WBPaper00061340:hyp3
WBPaper00061341:28C_24h_downregulated
WBPaper00061341:28C_48h_downregulated
WBPaper00061478:pie-1(ne4433)_upregulated
WBPaper00061479:hda-1(ne4747)_upregulated
WBPaper00061479:hda-1(ne4748)_upregulated
WBPaper00061479:mep-1(ne4629)_upregulated
WBPaper00061479:ubc-9(ne4833)_upregulated
WBPaper00061527:col-146-col-133
WBPaper00061613:human-amyloid-beta_downregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062167:mbl-1(tm1563)_downregulated
WBPaper00062184:PA14_downregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00062440:crh-1(n3315)_upregulated
WBPaper00062446:nhr-8(hd117)_downregulated
WBPaper00062456:doxycycline_upregulated_CB4856_protein
WBPaper00062518:atf-4_regulated
WBPaper00062590:Aging_downregulated_body-wall-muscle
WBPaper00062590:Aging_downregulated_neuron
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064107:lin-35(n745)_downregulated
WBPaper00064130:Beta-Amyloid_24h_upregulated_mRNA
WBPaper00064158:xpo-1(RNAi)_downregulated
WBPaper00064229:B.thuringiensis-Cry5Ba_upregulated
WBPaper00064532:pals-25(icb98)_upregulated
WBPaper00064716:paraquat_downregulated
WBPaper00064727:daf-2(e1370)_upregulated
WBPaper00064769:him-17(me24)_upregulated
WBPaper00064850:glh-1(sam65)_downregulated
WBPaper00064871:hypoxia_upregulated_F1
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00065029:cadmium_downregulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_20C
WBPaper00065120:body-muscle-transcriptome
WBPaper00065158:AFD_depleted
WBPaper00065215:microgravity_downregulated_DESeq2
WBPaper00065315:mating_upregulated_Day2-7
WBPaper00065373:Cisplatin_downregulated_WT
WBPaper00065373:sek-1(km4)_downregulated_cisplatin
WBPaper00065392:Lb.plantarum_upregulated
WBPaper00065392:Lb.reuteri_upregulated
WBPaper00065392:P.pentosaceus_upregulated
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065749:Heat-Shock_upregulated_endu-2(tm4977)
WBPaper00065749:Heat-Shock_upregulated_N2
WBPaper00065835:Day5_vs_Day1_downregulated
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065926:pgph-2(overepxreesion)_upregulated_glucose
WBPaper00065945:epidermis-rpoa-2(-)_downregulated_transcript
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066085:hda-3(ok1991)_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
cgc4489_group_1
WBPaper00005124:cholesterol_10-9M_regulated
WBPaper00005124:progesterone_10-7M_regulated
WBPaper00024671:AFD_AWB_vs_unsorted_downregulated
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026952:class_F
WBPaper00028789:PA14_vs_gacA_downregulated_8hr
WBPaper00028789:PA14_vs_OP50_downregulated_8hr
WBPaper00030985:Erwinia_carotovora_downregulated
WBPaper00030985:Photorhabdus_luminescens_downregulated
WBPaper00031060:2-deoxy-D-glucose_upregulated
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00032062:age_regulated_genes
WBPaper00035892:Y.pestis_regulated
WBPaper00036286:Pattern_C
WBPaper00036375:depleted_in_PVD_OLL
WBPaper00036383:ash-2_Day8_regulated
WBPaper00036464:S.aureus-RN6390_regulated
WBPaper00038172:aak-2overexpression_up_regulated
WBPaper00038172:crh-1null_up_regulated
WBPaper00038172:tax-6null_up_regulated
WBPaper00038427:lin-54_embryo_changed
WBPaper00038462:aging_downregulated
WBPaper00039866:ClassComp_daf-19_downregulated
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2up
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040823:alg-1(gk214)_upregulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_old
WBPaper00040876:mir-35_downregulated
WBPaper00040963:Q50_up
WBPaper00040963:Q200_up
WBPaper00041002:HF_11d_2.0mM_Up
WBPaper00041002:HQ_3d_0.2mM_Up
WBPaper00041002:HQ_3d_2.0mM_Down
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00042274:tbx-2(bx59)_upregulated
WBPaper00045374:Benzene_upregulated
WBPaper00046548:dafachronic-acid_downregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00048637:lin-35(n745)_starvation_downregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00053550:daf-19(m86)_downregulated_3-fold-embryo
WBPaper00053550:daf-19(m86)_downregulated_L1
WBPaper00057098:SiO2-nanoparticles_downregulated
Interaction (85)
Map_infoMapVPosition4.98296Error0.000815
PositivePositive_cloneF57B1Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00025088
WBPaper00025192
WBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene