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WormBase Tree Display for Gene: WBGene00000377

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Name Class

WBGene00000377SMapS_parentSequenceT05C12
IdentityVersion1
NameCGC_namecct-1Person_evidenceWBPerson89
Sequence_nameT05C12.7
Molecular_nameT05C12.7
T05C12.7.1
CE02319
Other_nametcp-1
CELE_T05C12.7Accession_evidenceNDBBX284602
Public_namecct-1
DB_infoDatabaseAceViewgene2I477
WormQTLgeneWBGene00000377
WormFluxgeneWBGene00000377
NDBlocus_tagCELE_T05C12.7
PanthergeneCAEEL|WormBase=WBGene00000377|UniProtKB=P41988
familyPTHR11353
NCBIgene174318
RefSeqproteinNM_063321.5
SwissProtUniProtAccP41988
TREEFAMTREEFAM_IDTF106331
UniProt_GCRPUniProtAccP41988
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:20WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_info (11)
Molecular_infoCorresponding_CDST05C12.7
Corresponding_transcriptT05C12.7.1
Other_sequence (115)
Associated_featureWBsf644448
WBsf981236
WBsf988667
WBsf1012656
WBsf221702
WBsf221703
WBsf221704
Experimental_infoRNAi_result (37)
Expr_patternExpr598
Expr1544
Expr6615
Expr1027337
Expr1030203
Expr1156120
Expr2009769
Expr2028009
Drives_constructWBCnstr00002321
WBCnstr00012442
WBCnstr00037586
Construct_productWBCnstr00037586
AntibodyWBAntibody00000157
WBAntibody00001789
Microarray_results (28)
Expression_clusterWBPaper00026640:Development_Group_I
WBPaper00027057:DCR-1_interacting_adult
WBPaper00031040:TGF-beta_adult_downregulated
WBPaper00032528:L3_enriched
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00034755:ALG-1_interacting
WBPaper00037047:aging_accelerated_insoluble_protein
WBPaper00037047:insoluble_protein
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038118:aak-2(gt33)_upregulated
WBPaper00038289:oocyte_protein
WBPaper00040221:DAF-12_target_ALF4
WBPaper00040446:insoluble_protein
WBPaper00041071:spe-44_upregulated
WBPaper00041072:UTX-1_interacting_protein
WBPaper00041257:irradiation_downregulated
WBPaper00043951:insoluble_protein_day16_N2
WBPaper00044316:CH3HgCl_7.5uM_upregulated
WBPaper00044426:rotenone_24h_downregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044736:flat_dev_expression
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_downregulated
WBPaper00045774:clk-1_downregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00048810:CoQ-deficiency_downregulated
WBPaper00048910:Apoptosis-induced_mRNA-interacting_protein
WBPaper00048910:mRNA-interacting_protein
WBPaper00048988:neuron_expressed
WBPaper00049942:HeatShock_upregulated_hsf-1(+)
WBPaper00050199:hsf-1(ok600)_downregulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C
WBPaper00050686:glp-1(e2141)_downregulated
WBPaper00050698:DEP-1_interacting
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:germline_enriched
WBPaper00051245:body-wall-muscle_cytoplasm_expressed
WBPaper00051245:body-wall-muscle_nucleus_expressed
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051245:epidermis_nucleus_expressed
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00051245:intestine_nucleus_expressed
WBPaper00051245:pharyngeal-muscle_cytoplasm_expressed
WBPaper00051558:aging_regulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053254:hsp-90(RNAi)_upregulated_protein
WBPaper00053289:DREAM-target
WBPaper00053302:alovudine_24h_regulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053713:Pheromone-induced_postdauer_vs_control_upregulated
WBPaper00053713:Starvation-induced_postdauer_vs_control_downregulated
WBPaper00053810:daf-2(e1370)_downregulated
WBPaper00053810:isp-1(qm150)_downregulated
WBPaper00053814:25C_downregulated_OP50
WBPaper00053814:25C_downregulated_PY79
WBPaper00055648:germline_expressed
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056139:soil-microbiota_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056809:smn-1(ok355)_downregulated
WBPaper00056826:SGP_biased
WBPaper00056997:NMAD-1_interacting
WBPaper00057288:Cold_downregulated_transcript
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00058691:CFP-1_interacting_protein
WBPaper00059174:MEG-3_interacting
WBPaper00059254:CSR-1_interacting
WBPaper00059254:PRG-1_interacting
WBPaper00059328:mrps-5(RNAi)_downregulated_protein
WBPaper00059471:EGL-43_interacting
WBPaper00059605:MUT-16_interacting
WBPaper00059763:neuron_expressed
WBPaper00060014:set-2(zr2012)_upregulated
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061340:ALM_BDU
WBPaper00061340:ALM_PLM
WBPaper00061340:Neuroblast_ALM_BDU
WBPaper00061340:PLM
WBPaper00061340:PLM_ALN_grandparent
WBPaper00061341:28C_24h_downregulated
WBPaper00061377:MYRF-1_interacting
WBPaper00061466:nath-10(icb99)_downregulated
WBPaper00061478:SUMO-conjugated_protein
WBPaper00061479:HDA-1_interacting_protein
WBPaper00061527:cids-2_2203-attf-2_2451
WBPaper00061527:hars-1-cct-4_20449
WBPaper00061651:ALM_enriched
WBPaper00061651:CAN_enriched
WBPaper00061651:PDE_enriched
WBPaper00061651:PLM_enriched
WBPaper00061902:camt-1(ok515)_regulated_RMG
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062498:PPM-1.D_interacting
WBPaper00062554:MAGU-2_interacting
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064064:DAF-15_interacting
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064201:SNA-3_interacting
WBPaper00064624:iHg-induced_aggregome
WBPaper00064716:paraquat_upregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065158:AFD_depleted
WBPaper00065945:epidermis-rpoa-2(-)_downregulated_protein
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4386_cluster_4_5
cgc4489_group_3
WBPaper00025032:cluster_21
WBPaper00025032:cluster_55
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00031003:0hr_muscle_enriched
WBPaper00031003:total_muscle_enriched
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031532:Larva_Pan_Neuronal_Enriched
WBPaper00032948:FedUp
WBPaper00034739:N2lessDR1350
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2down
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00040963:TA100_down
WBPaper00040963:TA300_down
WBPaper00041002:HF_3d_2.0mM_Down
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041906:I-4317_vs_OP50_10d
WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00042128:gei-8(ok1671)_downregulated
WBPaper00045263:isp-1(qm150)_downregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00045960:L1-L4-lethargus_downregulated
WBPaper00045960:L4-lethargus_downregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00053236:daf-16(mgDF50)_regulated_Starved
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
[cgc6390]:oogenesis-enriched
Interaction (172)
Map_infoMapIIPosition0.749366Error0.00012
PositivePositive_cloneT05C12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (26)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene