WormBase Tree Display for Gene: WBGene00000142
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| WBGene00000142 | SMap | S_parent | Sequence | C08B6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | aos-1 | Person_evidence | WBPerson89 | |||||
| Sequence_name | C08B6.9 | ||||||||
| Molecular_name | C08B6.9 | ||||||||
| C08B6.9.1 | |||||||||
| CE52896 | |||||||||
| Other_name | CELE_C08B6.9 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | aos-1 | ||||||||
| DB_info | Database | AceView | gene | 5K608 | |||||
| WormQTL | gene | WBGene00000142 | |||||||
| WormFlux | gene | WBGene00000142 | |||||||
| NDB | locus_tag | CELE_C08B6.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000142|UniProtKB=Q17820 | |||||||
| family | PTHR10953 | ||||||||
| NCBI | gene | 179409 | |||||||
| RefSeq | protein | NM_073203.6 | |||||||
| SwissProt | UniProtAcc | Q17820 | |||||||
| TREEFAM | TREEFAM_ID | TF315037 | |||||||
| UniProt_GCRP | UniProtAcc | Q17820 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | aos | ||||||||
| Allele (30) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00059298 | ||||||||
| 00059299 | |||||||||
| 00059300 | |||||||||
| 00059301 | |||||||||
| 00059302 | |||||||||
| 00059303 | |||||||||
| 00059304 | |||||||||
| 00059305 | |||||||||
| 00106858 | |||||||||
| Contained_in_operon | CEOP5244 | ||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00010882 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00006700 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00020184 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00006735 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00004341 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00006699 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00018357 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | aos-1 encodes the C. elegans ortholog of Saccharomyces cerevisiae Aos1p and human SUMO-1 activating enzyme E1 N subunit; by homology, AOS-1 is predicted to form, with a catalytic subunit, UBA-2, a heterodimeric enzyme that activates the ubiquitin-like protein SMO-1/SUMO in preparation for its covalent attachment to target proteins to regulate their subcellular localization and/or stability; in C. elegans, AOS-1 is required for embryonic and larval development, as well as for proper Hox gene regulation; uba-2/aos-1(RNAi) animals that survive embryogenesis show ectopic expression of EGL-5 and ectopic anterior sensory ray formation. | Paper_evidence | WBPaper00004540 | |||||
| WBPaper00005337 | |||||||||
| WBPaper00006514 | |||||||||
| WBPaper00023983 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 27 Jan 2005 00:00:00 | ||||||||
| Automated_description | Contributes to SUMO activating enzyme activity. Involved in protein sumoylation. Predicted to be located in cytoplasm. Predicted to be part of SUMO activating enzyme complex. Is an ortholog of human SAE1 (SUMO1 activating enzyme subunit 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C08B6.9 | |||||||
| Corresponding_CDS_history | C08B6.9:wp268 | ||||||||
| Corresponding_transcript | C08B6.9.1 | ||||||||
| Other_sequence (11) | |||||||||
| Associated_feature | WBsf234326 | ||||||||
| WBsf234327 | |||||||||
| WBsf234328 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00040078 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00028663 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007869 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00085851 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027025 | ||||||||
| Expr1030074 | |||||||||
| Expr1144146 | |||||||||
| Expr2009347 | |||||||||
| Expr2027583 | |||||||||
| Drives_construct | WBCnstr00037709 | ||||||||
| Construct_product | WBCnstr00037709 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (121) | |||||||||
| Interaction (57) | |||||||||
| Map_info | Map | V | Position | 2.2773 | Error | 0.000205 | |||
| Positive | Positive_clone | C08B6 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005337 | ||||||||
| WBPaper00006514 | |||||||||
| WBPaper00023983 | |||||||||
| WBPaper00026489 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00048493 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Sequence connection from [Jones D, Crowe E, Stevens TA, Candido EPM], 02/06/10 krb | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
