WormBase Tree Display for Sequence: T22D2

T22D2 DNA: T22D2 7780
  SMap: S_child: Gene_child: WBGene00006882 66 7734
      CDS_child: T22D2.1 79 7699
        T22D2.1:wp102 4541 7699
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g20n11_x5_II_p 79 7696
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g48n11_x5_II_p 922 1003
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g11n11_x5_II_p 79 7696
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g5n11_x5_II_p 79 7696
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g7n11_x5_II_p 79 7696
        RNASEQ_embryo_him-8_20dC_post-L1_g6n11_x5_II_p 79 7696
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g21n11_x5_II_p 79 7696
        RNASEQ_L4_soma_JK1107_no_DNaseI_g5n11_x5_II_p 79 7696
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g9n11_x5_II_p 79 7696
        RNASEQ_early_embryo_g18n11_x5_II_p 79 7696
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g11n11_x5_II_p 79 7696
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g18n11_x5_II_p 79 7696
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g4n11_x5_II_p 79 7696
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g10n11_x5_II_p 79 7696
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g6n11_x5_II_p 79 7696
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g31n11_x5_II_p 79 7696
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g25n11_x5_II_p 79 7696
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g19n11_x5_II_p 79 7696
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g13n11_x5_II_p 79 7696
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g55_x5_II_p 4541 5991
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g89_x5_II_p 6468 7696
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g47_x5_II_p 199 2127
        F42G2.gc7 79 3182
        T22D2.gc1 79 6821
        AG1201_T22D2.1.T1 79 7699
      Transcript: T22D2.1.1 66 7734
      PCR_product: cenix:156-h1 4470 5666
        cenix:162-c2 2030 2571
        mv_F42G2.1 80 3184
        mv_T22D2.1 3832 7697
        mv_T22D2.a 6527 6728
        sjj_F42G2.1 746 3042
        sjj_T22D2.1 4078 5652
        smd_3T22D2.1 4078 5652
      Allele: WBVar01790192 2735 2735
        WBVar01790193 2798 2798
        WBVar01790194 3004 3004
        WBVar01790195 3080 3080
        WBVar00246352 3687 3687
        WBVar01790196 3542 3542
        WBVar01790197 4907 4907
        WBVar01790198 6325 6325
        WBVar01241895 842 842
        WBVar01241906 1034 1034
        WBVar01392962 5558 5558
        WBVar01241918 6821 6821
        WBVar01959430 6807 6821
        WBVar00359317 249 249
        WBVar00359318 852 852
        WBVar00359319 1068 1068
        WBVar00359320 1865 1865
        WBVar00359321 2340 2340
        WBVar00359322 2543 2543
        WBVar00359323 2885 2885
        WBVar00359324 3143 3143
        WBVar00359325 3366 3366
        WBVar00359326 3701 3701
        WBVar00143698 5183 5183
        WBVar01477102 512 518
        WBVar00359327 3883 3883
        WBVar00359328 4342 4342
        WBVar00359329 4359 4359
        WBVar00359330 4507 4507
        WBVar00359331 5068 5068
        WBVar00359332 5359 5359
        WBVar00359333 5974 5974
        WBVar00359334 7086 7086
        WBVar02129489 247 247
        WBVar02129490 745 745
        WBVar02129491 1914 1914
        WBVar00088178 891 891
        WBVar01536124 1161 1161
        WBVar00712028 155 155
        WBVar00712029 218 218
        WBVar00712030 534 534
        WBVar00712031 564 564
        WBVar00712032 585 585
        WBVar00712033 649 649
        WBVar00712034 702 702
        WBVar01988900 1939 1940
        WBVar00602191 4470 4470
        WBVar01718506 6197 6197
        WBVar00712035 781 781
        WBVar01988901 5787 5787
        WBVar00712036 850 850
        WBVar01718507 6862 6862
        WBVar01988902 6313 6313
        WBVar00712037 856 856
        WBVar01363745 1939 1940
        WBVar00712038 1072 1072
        WBVar00712039 1391 1391
        WBVar00712040 1495 1495
        WBVar00712041 1541 1541
        WBVar00712042 1542 1542
        WBVar00712043 1545 1545
        WBVar00712044 1587 1587
        WBVar00712045 1594 1594
        WBVar00712046 1726 1726
        WBVar00712047 1884 1884
        WBVar00712048 2044 2044
        WBVar00712049 2128 2128
        WBVar00712050 2597 2597
        WBVar00712051 2627 2627
        WBVar00712052 2979 2979
        WBVar00712053 3063 3063
        WBVar00712054 3117 3117
        WBVar00712055 3137 3137
        WBVar00712056 3358 3358
        WBVar02035454 2446 2446
        WBVar02035455 6307 6307
        WBVar00712057 3366 3366
        WBVar00712058 3620 3620
        WBVar00712059 3641 3641
        WBVar00546591 1328 1328
        WBVar00712060 3662 3662
        WBVar00546599 6442 6442
        WBVar00712061 3756 3756
        WBVar01363857 6311 6311
        WBVar00712062 3771 3771
        WBVar01363858 6312 6312
        WBVar00712063 3807 3807
        WBVar00712064 3812 3812
        WBVar00712065 3900 3900
        WBVar00712066 3987 3987
        WBVar00712067 4150 4150
        WBVar00712068 4198 4198
        WBVar00712069 4640 4640
        WBVar00712070 4754 4754
        WBVar00712071 4770 4770
        WBVar02116839 6314 6314
        WBVar00712072 5095 5095
        WBVar00712073 5469 5469
        WBVar00712074 5553 5553
        WBVar00712075 5701 5701
        WBVar00712076 5769 5769
        WBVar00712077 5867 5867
        WBVar00712078 6042 6042
        WBVar01764610 952 952
        WBVar01298790 2128 2128
        WBVar01764611 1192 1192
        WBVar00712079 6395 6395
        WBVar01764612 1394 1394
        WBVar01298801 6412 6412
        WBVar00712080 6516 6516
        WBVar01489694 3558 3558
        WBVar00712081 6584 6584
        WBVar01764613 1887 1887
        WBVar01490982 1145 1145
        WBVar00712082 6708 6708
        WBVar01764614 2960 2960
        WBVar02028866 1034 1035
        WBVar01764615 4992 4992
        WBVar00712083 6782 6782
        WBVar02028867 2701 2744
        WBVar00712084 6783 6783
        WBVar01764616 6039 6039
        WBVar01764617 7035 7035
        WBVar00712085 6935 6935
        WBVar02028868 5705 5706
        WBVar00712086 6951 6951
        WBVar00712087 6972 6972
        WBVar00712088 6977 6977
        WBVar00712089 7102 7102
        WBVar01232961 131 131
        WBVar00712090 7181 7181
        WBVar01232965 1333 1333
        WBVar01232966 1432 1432
        WBVar01232967 1515 1515
        WBVar01232968 1642 1642
        WBVar01232969 1997 1997
        WBVar01232971 2679 2679
        WBVar01232972 3054 3054
        WBVar01232977 5293 5293
        WBVar01232978 5431 5431
        WBVar01232979 5704 5704
        WBVar01232980 6331 6331
        WBVar01232981 6467 6467
        WBVar00167095 544 544
        WBVar01232983 6925 6925
        WBVar00167096 1253 1253
        WBVar00167097 1433 1433
        WBVar00167098 1972 1972
        WBVar00167099 2008 2008
        WBVar00167100 2466 2466
        WBVar00167101 3897 3897
        WBVar00167102 4502 4502
        WBVar00167103 5554 5554
        WBVar00167104 6396 6396
        WBVar00167105 6787 6787
        WBVar00167106 7071 7071
        WBVar00244741 847 847
        WBVar00244742 1042 1042
        WBVar00244744 1272 1272
        WBVar01641862 1513 1513
        WBVar01641863 4399 4399
        WBVar01641864 6313 6313
        WBVar01933845 3749 3752
        WBVar01625416 1839 1839
        WBVar01625417 2016 2016
        WBVar01625418 3689 3689
        WBVar01625419 3993 3993
        WBVar01625420 4350 4350
        WBVar01625421 4939 4939
        WBVar01625422 5011 5011
        WBVar00299515 558 558
        WBVar01625423 5037 5037
        WBVar01625424 6347 6347
        WBVar01625425 6407 6407
        WBVar01625426 7089 7089
        WBVar01790187 548 548
        WBVar01790188 1103 1103
        WBVar01790189 1231 1231
        WBVar01790190 1628 1628
        WBVar01993897 803 803
        WBVar01790191 1973 1973
      Oligo_set: Aff_T22D2.1 5929 7699
      Feature_object: WBsf986944 788 872
        WBsf986945 1602 1684
        WBsf986946 2042 2094
        WBsf986947 2522 2672
        WBsf986948 4002 4152
        WBsf986949 5082 5171
        WBsf1011709 788 852
        WBsf1011710 1622 1684
        WBsf015981 65 66
        WBsf271447 793 794
        WBsf952853 65 66
        WBsf952854 891 892
        WBsf952855 6730 6729
        WBsf363023 2131 2152
        WBsf368620 1042 1248
        WBsf368726 5107 5152
        WBsf371309 5540 5805
        WBsf371370 620 1545
        WBsf383069 5203 5374
        WBsf387518 2995 3010
        WBsf388987 2686 2739
        WBsf389189 5653 5681
        WBsf657391 281 281
      Feature_data: T22D2:Polysome 1 7780
        T22D2:TranscriptionallyActiveRegion 1 7780
        T22D2:ChIPSeqTF 1 7780
        T22D2:TRF 1 7780
        T22D2:Dust 1 7780
        T22D2:inverted 1 7780
      Homol_data: T22D2:RNAi 1 7780
        T22D2:SAGE 1 7780
        T22D2:Mass-spec 1 7780
        T22D2:G4_DNA 1 7780
        T22D2:wublastx_brenneri 1 7780
        T22D2:wublastx_briggsae 1 7780
        T22D2:wublastx_brugia 1 7780
        T22D2:wublastx_fly 1 7780
        T22D2:wublastx_human 1 7780
        T22D2:wublastx_japonica 1 7780
        T22D2:wublastx_ovolvulus 1 7780
        T22D2:wublastx_pristionchus 1 7780
        T22D2:wublastx_remanei 1 7780
        T22D2:wublastx_slimSwissProt 1 7780
        T22D2:wublastx_sratti 1 7780
        T22D2:wublastx_tmuris 1 7780
        T22D2:RepeatMasker 1 7780
  Structure: From: Source: CHROMOSOME_II
    Overlap_right: F53G2 7181
    Overlap_left: F42G2
    Clone_left_end: F53G2 7181
    Clone_right_end: F42G2 3400
  DB_info: Database: EMBL NDB_AC FO081375
        NDB_ID _AC006688
        NDB_SV FO081375.1
    Secondary_accession: AC006688
    DB_remark: The 5' clone is F42G2, 3400 bp overlap; the 3' clone is F53G2, 600 bp overlap. Actual start of this clone is at base position 14206 of F42G2; actual end is at 15321 of F53G2.
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Langston Y
      Antoniou B
    From_laboratory: RW
    Date: 09 Jan 1998 00:00:00
    Date_directory
    Species: Caenorhabditis elegans
  Visible: Clone: T22D2
    Remark: [20030612 db] added 1 bp ("C") at 155
      [20030612 db] added 3199 bp to the 5' end
  Properties: Genomic_canonical
    Checksum: MD5: e48df6145d1f6458bac04b6ab2502127
    Status: Finished
      Submitted: 09 Jan 1998 00:00:00
  Map: Sequence-II
  Interpolated_map_position: II -13.8053
  Method: Genomic_canonical