WormBase Tree Display for Variation: WBVar00143698

WBVar00143698 Evidence: Paper_evidence: WBPaper00006290
  Name: Public_name: e1036
    Other_name: CE34375:p.Arg732Ter
      T22D2.1.1:c.2194C>T
    HGVSg: CHROMOSOME_II:g.2448396C>T
  Sequence_details: SMap: S_parent: Sequence: T22D2
    Flanking_sequences: ataaaatttcctatttattctaggtggaac gaaaccaagtcaccactgcatccaacacca
    Mapping_target: T22D2
    Type_of_mutation: Substitution: c t Paper_evidence: WBPaper00006290
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00005348
    Laboratory: CB
    Status: Live
  Affects: Gene: WBGene00006882
    Transcript: T22D2.1.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: T22D2.1.1:c.2194C>T
        HGVSp: CE34375:p.Arg732Ter
        cDNA_position: 2207
        CDS_position: 2194
        Protein_position: 732
        Exon_number: 13/20
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
    Interactor: WBInteraction000051810
      WBInteraction000051813
      WBInteraction000051815
      WBInteraction000051817
      WBInteraction000501310
      WBInteraction000503804
      WBInteraction000519202
      WBInteraction000558282
  Genetics: Interpolated_map_position: II -13.7339
  Description: Phenotype (12)
    Phenotype_not_observed: WBPhenotype:0000220 Paper_evidence: WBPaper00038447
        Curator_confirmed: WBPerson712
        Remark: Vulval cell division is normal. Paper_evidence: WBPaper00038447
            Curator_confirmed: WBPerson712
        Temperature_sensitive: Cold_sensitive: 17 Paper_evidence: WBPaper00038447
              Curator_confirmed: WBPerson712
      WBPhenotype:0000510 Paper_evidence: WBPaper00038447
        Curator_confirmed: WBPerson712
        Remark: Vulval invagination is normal. Paper_evidence: WBPaper00038447
            Curator_confirmed: WBPerson712
        Temperature_sensitive: Cold_sensitive: 17 Paper_evidence: WBPaper00038447
              Curator_confirmed: WBPerson712
      WBPhenotype:0000699 Paper_evidence: WBPaper00038447
        Curator_confirmed: WBPerson712
        Remark: Measurements of vulval height and width after reductions of VAB-19 and integrin function revealed no differences when compared with wild-type animals. Paper_evidence: WBPaper00038447
            Curator_confirmed: WBPerson712
        Temperature_sensitive: Cold_sensitive: 17 Paper_evidence: WBPaper00038447
              Curator_confirmed: WBPerson712
  Reference: WBPaper00038447
    WBPaper00006290
    WBPaper00032244
  Remark: Behave genetically null at 15C, hypomorph at higher than 15C
  Method: Substitution_allele