WormBase Tree Display for Sequence: C44C8
expand all nodes | collapse all nodes | view schema
| C44C8 | DNA | C44C8 | 27179 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00016647 | 19785 | 21160 | |
| WBGene00045301 | 13048 | 14828 | ||||
| WBGene00045300 | 17200 | 18981 | ||||
| WBGene00016648 | 15633 | 17008 | ||||
| WBGene00007007 | 5586 | 10442 | ||||
| WBGene00016649 | 11481 | 12856 | ||||
| WBGene00016646 | 23938 | 25313 | ||||
| WBGene00045299 | 21352 | 23133 | ||||
| CDS_child (66) | ||||||
| Transcript | C44C8.1.1 | 23938 | 25313 | |||
| C44C8.10.1 | 13048 | 14828 | ||||
| C44C8.2.1 | 19785 | 21160 | ||||
| C44C8.3.1 | 15633 | 17008 | ||||
| C44C8.4.1 | 11481 | 12856 | ||||
| C44C8.6.1 | 5588 | 10442 | ||||
| C44C8.6.2 | 5586 | 10430 | ||||
| C44C8.8.1 | 21352 | 23133 | ||||
| C44C8.9.1 | 17200 | 18981 | ||||
| PCR_product (100) | ||||||
| Allele (213) | ||||||
| Oligo_set (3) | ||||||
| Feature_object | WBsf995295 | 4062 | 4212 | |||
| WBsf995296 | 5062 | 5212 | ||||
| WBsf995297 | 6022 | 6172 | ||||
| WBsf995298 | 6622 | 6684 | ||||
| WBsf1016632 | 3962 | 4112 | ||||
| WBsf1016633 | 6022 | 6172 | ||||
| WBsf003679 | 5587 | 5588 | ||||
| WBsf025711 | 10428 | 10429 | ||||
| WBsf026004 | 10410 | 10415 | ||||
| WBsf040655 | 11481 | 12855 | ||||
| WBsf040656 | 11481 | 12855 | ||||
| WBsf040657 | 11481 | 18980 | ||||
| WBsf040658 | 13048 | 14827 | ||||
| WBsf040659 | 13048 | 14827 | ||||
| WBsf040660 | 13048 | 14827 | ||||
| WBsf040661 | 15633 | 17007 | ||||
| WBsf040662 | 15633 | 17007 | ||||
| WBsf040663 | 17200 | 18980 | ||||
| WBsf040664 | 17200 | 18980 | ||||
| WBsf040665 | 17200 | 18980 | ||||
| WBsf040668 | 19785 | 21159 | ||||
| WBsf040669 | 19785 | 21159 | ||||
| WBsf040670 | 21352 | 23132 | ||||
| WBsf040671 | 21352 | 23132 | ||||
| WBsf040672 | 21352 | 23132 | ||||
| WBsf040673 | 23938 | 25312 | ||||
| WBsf040674 | 23938 | 25312 | ||||
| WBsf040676 | 25505 | 26289 | ||||
| WBsf040677 | 25505 | 26289 | ||||
| WBsf085545 | 10429 | 10429 | ||||
| WBsf086651 | 10417 | 10417 | ||||
| WBsf087172 | 6684 | 6684 | ||||
| WBsf087173 | 10411 | 10411 | ||||
| WBsf087593 | 10428 | 10428 | ||||
| WBsf087922 | 2154 | 2154 | ||||
| WBsf088523 | 10416 | 10416 | ||||
| WBsf089150 | 6714 | 6714 | ||||
| WBsf090762 | 6690 | 6690 | ||||
| WBsf184264 | 5587 | 5588 | ||||
| WBsf188402 | 2154 | 2155 | ||||
| WBsf188408 | 10429 | 10430 | ||||
| WBsf188769 | 2152 | 2153 | ||||
| WBsf227886 | 2078 | 2123 | ||||
| WBsf227887 | 2078 | 2152 | ||||
| WBsf227888 | 10137 | 10171 | ||||
| WBsf227889 | 10137 | 10213 | ||||
| WBsf227890 | 10137 | 10427 | ||||
| WBsf227891 | 12857 | 12890 | ||||
| WBsf227892 | 17009 | 17042 | ||||
| WBsf227893 | 18982 | 19016 | ||||
| WBsf227894 | 18982 | 19500 | ||||
| WBsf227895 | 21161 | 21194 | ||||
| WBsf227896 | 25314 | 25347 | ||||
| WBsf275457 | 12891 | 12892 | ||||
| WBsf275982 | 10118 | 10119 | ||||
| WBsf276008 | 2104 | 2105 | ||||
| WBsf626852 | 7346 | 7345 | ||||
| WBsf626853 | 10399 | 10400 | ||||
| WBsf627605 | 2103 | 2104 | ||||
| WBsf628096 | 2126 | 2127 | ||||
| WBsf628236 | 10406 | 10405 | ||||
| WBsf965111 | 4157 | 4158 | ||||
| WBsf965121 | 6683 | 6684 | ||||
| WBsf965129 | 9007 | 9006 | ||||
| WBsf965139 | 10827 | 10826 | ||||
| WBsf965140 | 11161 | 11160 | ||||
| WBsf965141 | 11224 | 11225 | ||||
| WBsf965145 | 11777 | 11778 | ||||
| WBsf965148 | 11848 | 11847 | ||||
| WBsf965149 | 11951 | 11950 | ||||
| WBsf965152 | 12550 | 12549 | ||||
| WBsf965157 | 13133 | 13132 | ||||
| WBsf965162 | 14825 | 14824 | ||||
| WBsf965163 | 14978 | 14977 | ||||
| WBsf965165 | 15312 | 15311 | ||||
| WBsf965166 | 15375 | 15376 | ||||
| WBsf965170 | 15929 | 15930 | ||||
| WBsf965171 | 16000 | 15999 | ||||
| WBsf965172 | 16103 | 16102 | ||||
| WBsf965177 | 16702 | 16701 | ||||
| WBsf965181 | 17285 | 17284 | ||||
| WBsf965190 | 18978 | 18977 | ||||
| WBsf965192 | 19131 | 19130 | ||||
| WBsf965193 | 19465 | 19464 | ||||
| WBsf965194 | 19528 | 19529 | ||||
| WBsf965198 | 20081 | 20082 | ||||
| WBsf965199 | 20152 | 20151 | ||||
| WBsf965200 | 20255 | 20254 | ||||
| WBsf965205 | 20854 | 20853 | ||||
| WBsf965209 | 21437 | 21436 | ||||
| WBsf965213 | 23130 | 23129 | ||||
| WBsf965214 | 23283 | 23282 | ||||
| WBsf965216 | 23617 | 23616 | ||||
| WBsf965217 | 23680 | 23681 | ||||
| WBsf965219 | 24234 | 24235 | ||||
| WBsf965222 | 24305 | 24304 | ||||
| WBsf965223 | 24408 | 24407 | ||||
| WBsf965224 | 25007 | 25006 | ||||
| WBsf965226 | 25590 | 25589 | ||||
| WBsf444549 | 4945 | 5388 | ||||
| WBsf445461 | 5034 | 5303 | ||||
| WBsf446347 | 5179 | 5267 | ||||
| WBsf447631 | 5845 | 6079 | ||||
| WBsf447762 | 10613 | 10633 | ||||
| WBsf447780 | 5553 | 5583 | ||||
| WBsf447936 | 6374 | 6541 | ||||
| WBsf448495 | 10546 | 10699 | ||||
| WBsf449504 | 4975 | 5349 | ||||
| WBsf450590 | 4840 | 5359 | ||||
| WBsf452265 | 5032 | 5268 | ||||
| WBsf453162 | 5040 | 5315 | ||||
| WBsf453451 | 5041 | 5272 | ||||
| WBsf455217 | 4939 | 5354 | ||||
| WBsf457447 | 4979 | 5358 | ||||
| WBsf458790 | 4984 | 5343 | ||||
| WBsf459528 | 4984 | 5343 | ||||
| WBsf460820 | 5004 | 5325 | ||||
| WBsf461203 | 4993 | 5281 | ||||
| WBsf461372 | 4988 | 5330 | ||||
| WBsf462875 | 4945 | 5316 | ||||
| WBsf463881 | 4960 | 5328 | ||||
| WBsf464792 | 4986 | 5360 | ||||
| WBsf467016 | 4959 | 5296 | ||||
| WBsf468291 | 10245 | 10299 | ||||
| WBsf468558 | 5001 | 5315 | ||||
| WBsf468869 | 4949 | 5359 | ||||
| WBsf469469 | 5034 | 5271 | ||||
| WBsf469673 | 4988 | 5359 | ||||
| WBsf470130 | 4919 | 5337 | ||||
| WBsf470674 | 9207 | 9219 | ||||
| WBsf470755 | 10310 | 10671 | ||||
| WBsf471700 | 5013 | 5306 | ||||
| WBsf472416 | 4950 | 5378 | ||||
| WBsf473458 | 7409 | 7860 | ||||
| WBsf473832 | 10281 | 10319 | ||||
| WBsf476268 | 5002 | 5329 | ||||
| WBsf477061 | 10266 | 10438 | ||||
| WBsf477089 | 2235 | 2361 | ||||
| WBsf478745 | 5075 | 5264 | ||||
| WBsf479645 | 4863 | 5342 | ||||
| WBsf481813 | 4935 | 5352 | ||||
| WBsf482809 | 4947 | 5371 | ||||
| WBsf483560 | 4967 | 5351 | ||||
| WBsf483878 | 706 | 1065 | ||||
| WBsf484102 | 4983 | 5334 | ||||
| WBsf485587 | 4975 | 5356 | ||||
| WBsf485922 | 5000 | 5350 | ||||
| WBsf486856 | 4938 | 5343 | ||||
| WBsf487928 | 5011 | 5316 | ||||
| WBsf490406 | 4954 | 5369 | ||||
| WBsf491651 | 2435 | 2436 | ||||
| WBsf491700 | 5096 | 5193 | ||||
| WBsf493086 | 4986 | 5349 | ||||
| WBsf494969 | 4836 | 5391 | ||||
| WBsf497371 | 4939 | 5295 | ||||
| WBsf497821 | 4970 | 5323 | ||||
| WBsf042367 | 4745 | 5088 | ||||
| WBsf645775 | 5155 | 5155 | ||||
| WBsf645776 | 5196 | 5235 | ||||
| WBsf659900 | 1335 | 1335 | ||||
| WBsf703658 | 5119 | 5092 | ||||
| WBsf262275 | 14752 | 14922 | ||||
| Feature_data | C44C8:Polysome | 1 | 27179 | |||
| C44C8:TranscriptionallyActiveRegion | 1 | 27179 | ||||
| C44C8:ChIPSeqTF | 1 | 27179 | ||||
| C44C8:TRF | 1 | 27179 | ||||
| C44C8:Dust | 1 | 27179 | ||||
| C44C8:inverted | 1 | 27179 | ||||
| Homol_data (18) | ||||||
| Structure | From | Source | CHROMOSOME_IV | |||
| Overlap_right | F58H7 | 26980 | ||||
| Overlap_left | Y55F3BR | |||||
| Clone_left_end | C44C8 | 1 | ||||
| Clone_right_end | C44C8 | 27179 | ||||
| DB_info | Database | EMBL | NDB_AC | FO080859 | ||
| NDB_ID | _AF100655 | |||||
| NDB_SV | FO080859.1 | |||||
| Secondary_accession | AF100655 | |||||
| DB_remark | The 5' clone is Y55F3BR, 2500 bp overlap; the 3' clone is F58H7, 200 bp overlap. Actual start of this clone is at base position 1 of C44C8; actual end is at 27179 of C44C8. | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Bradshaw H | ||||
| Graves T | ||||||
| Fronick W | ||||||
| From_laboratory | RW | |||||
| Date | 09 Aug 1999 00:00:00 | |||||
| 19 Aug 1997 00:00:00 | ||||||
| Date_directory | ||||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | C44C8 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 67f137a3f4942736cdf2fadfcca92652 | ||||
| Status | Finished | |||||
| Submitted | 09 Aug 1999 00:00:00 | |||||
| Map | Sequence-IV | |||||
| Interpolated_map_position | IV | -23.1664 | ||||
| Method | Genomic_canonical |
