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WormBase Tree Display for Gene: WBGene00016647

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Name Class

WBGene00016647SMapS_parentSequenceC44C8
IdentityVersion3
NameCGC_namefbxc-4Person_evidenceWBPerson655
Sequence_nameC44C8.2
Molecular_nameC44C8.2
C44C8.2.1
CE40754
Other_nameCELE_C44C8.2Accession_evidenceNDBBX284604
Public_namefbxc-4
DB_infoDatabaseAceViewgene4B653
WormQTLgeneWBGene00016647
WormFluxgeneWBGene00016647
NDBlocus_tagCELE_C44C8.2
PanthergeneCAEEL|WormBase=WBGene00016647|UniProtKB=G5EG90
familyPTHR31379
NCBIgene183448
RefSeqproteinNM_067608.4
TREEFAMTREEFAM_IDTF322489
TrEMBLUniProtAccG5EG90
UniProt_GCRPUniProtAccG5EG90
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:57WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
228 Feb 2007 15:44:22WBPerson1867EventSplit_intoWBGene00045299
317 Jun 2008 14:44:53WBPerson2970Name_changeCGC_namefbxc-4
Split_intoWBGene00045299
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfbxc
Allele (22)
RNASeq_FPKM (74)
Ortholog (11)
Paralog (50)
Structured_descriptionAutomated_descriptionEnriched in intestine and neurons based on RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and pie-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including D-glucopyranose; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF3557 and Domain of unknown function (DUF3557).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC44C8.2
Corresponding_CDS_historyC44C8.2:wp172
Corresponding_transcriptC44C8.2.1
Associated_featureWBsf227895
Experimental_infoRNAi_resultWBRNAi00011942Inferred_automaticallyRNAi_primary
WBRNAi00042469Inferred_automaticallyRNAi_primary
WBRNAi00016035Inferred_automaticallyRNAi_primary
WBRNAi00011943Inferred_automaticallyRNAi_primary
WBRNAi00042472Inferred_automaticallyRNAi_primary
WBRNAi00042474Inferred_automaticallyRNAi_primary
WBRNAi00042473Inferred_automaticallyRNAi_primary
WBRNAi00011945Inferred_automaticallyRNAi_primary
WBRNAi00011944Inferred_automaticallyRNAi_primary
Expr_patternExpr1146460
Drives_constructWBCnstr00027914
Construct_productWBCnstr00027914
Microarray_results180035_s_at
Expression_cluster (67)
Interaction (116)
Map_infoMapIVPosition-23.1435
PositivePositive_cloneC44C8Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene