WormBase Tree Display for Gene: WBGene00045299
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WBGene00045299 | SMap | S_parent | Sequence | C44C8 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | fbxc-11 | Person_evidence | WBPerson655 | |||||
Sequence_name | C44C8.8 | ||||||||
Molecular_name | C44C8.8 | ||||||||
C44C8.8.1 | |||||||||
CE40753 | |||||||||
Other_name | CELE_C44C8.8 | Accession_evidence | NDB | BX284604 | |||||
Public_name | fbxc-11 | ||||||||
DB_info | Database | WormFlux | gene | WBGene00045299 | |||||
NDB | locus_tag | CELE_C44C8.8 | |||||||
NCBI | gene | 6418670 | |||||||
RefSeq | protein | NM_001129290.1 | |||||||
TREEFAM | TREEFAM_ID | TF322489 | |||||||
TrEMBL | UniProtAcc | G5EG46 | |||||||
UniProt_GCRP | UniProtAcc | G5EG46 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 Feb 2007 15:44:22 | WBPerson1867 | Event | Split_from | WBGene00016647 | ||
2 | 17 Jun 2008 14:44:53 | WBPerson2970 | Name_change | CGC_name | fbxc-11 | ||||
Split_from | WBGene00016647 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | fbxc | ||||||||
Allele (20) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00143883 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||
chrIV_pilon.g9593 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Paralog (37) | |||||||||
Structured_description | Automated_description | Enriched in germ line based on RNA-seq studies. Is affected by several genes including daf-16; tph-1; and pgl-1 based on RNA-seq and microarray studies. Is affected by nine chemicals including mianserin; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF3557 and Domain of unknown function (DUF3557). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C44C8.8 | |||||||
Corresponding_transcript | C44C8.8.1 | ||||||||
Experimental_info | RNAi_result | WBRNAi00042477 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00016034 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00042471 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00042476 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00042475 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1146465 | ||||||||
Drives_construct | WBCnstr00023267 | ||||||||
Construct_product | WBCnstr00023267 | ||||||||
Microarray_results | 180301_s_at | ||||||||
182449_s_at | |||||||||
Aff_C44C8.2 | |||||||||
Expression_cluster (48) | |||||||||
SAGE_tag | SAGE:aagctttgaagtaccta | Strand | Sense | ||||||
SAGE:tatctcttcc | Strand | Antisense | |||||||
SAGE:aagctttgaa | Strand | Sense | |||||||
SAGE:cattttccgatcgtaat | Strand | Antisense | |||||||
Map_info | Map | IV | Position | -23.1377 | |||||
Positive | Positive_clone | C44C8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |