WormBase Tree Display for Gene: WBGene00016646
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WBGene00016646 | SMap | S_parent | Sequence | C44C8 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | fbxc-5 | Person_evidence | WBPerson655 | |||||
Sequence_name | C44C8.1 | ||||||||
Molecular_name | C44C8.1 | ||||||||
C44C8.1.1 | |||||||||
CE40752 | |||||||||
Other_name | CELE_C44C8.1 | Accession_evidence | NDB | BX284604 | |||||
Public_name | fbxc-5 | ||||||||
DB_info | Database | AceView | gene | 4B655 | |||||
WormQTL | gene | WBGene00016646 | |||||||
WormFlux | gene | WBGene00016646 | |||||||
NDB | locus_tag | CELE_C44C8.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00016646|UniProtKB=G5EGJ4 | |||||||
family | PTHR31379 | ||||||||
NCBI | gene | 183447 | |||||||
RefSeq | protein | NM_001392250.1 | |||||||
TREEFAM | TREEFAM_ID | TF322489 | |||||||
TrEMBL | UniProtAcc | G5EGJ4 | |||||||
UniProt_GCRP | UniProtAcc | G5EGJ4 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 28 Feb 2007 15:43:41 | WBPerson1867 | Event | Split_into | WBGene00045298 | ||||
3 | 17 Jun 2008 14:44:53 | WBPerson2970 | Name_change | CGC_name | fbxc-5 | ||||
Split_into | WBGene00045298 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | fbxc | ||||||||
Allele (17) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (11) | |||||||||
Paralog (50) | |||||||||
Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enriched in intestine and neurons based on RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and hsf-1 based on microarray and RNA-seq studies. Is affected by eleven chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF3557 and Domain of unknown function (DUF3557). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C44C8.1 | |||||||
Corresponding_CDS_history | C44C8.1:wp172 | ||||||||
Corresponding_transcript | C44C8.1.1 | ||||||||
Associated_feature | WBsf227896 | ||||||||
Experimental_info | RNAi_result | WBRNAi00011942 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00042469 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00016035 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00011943 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00042472 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00042474 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00042473 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00011945 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00011944 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1014593 | ||||||||
Expr1146458 | |||||||||
Drives_construct | WBCnstr00027915 | ||||||||
Construct_product | WBCnstr00027915 | ||||||||
Microarray_results | 180035_s_at | ||||||||
Expression_cluster (71) | |||||||||
Interaction (21) | |||||||||
Map_info | Map | IV | Position | -23.1298 | |||||
Positive | Positive_clone | C44C8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00012854 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |