WormBase Tree Display for Sequence: T10A3
expand all nodes | collapse all nodes | view schema
T10A3 | DNA | T10A3 | 11647 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child | WBGene00006750 | 11568 | 3563 | |
WBGene00200328 | 1180 | 1402 | ||||
WBGene00199634 | 955 | 1104 | ||||
WBGene00198251 | 538 | 684 | ||||
WBGene00303398 | 3314 | 766 | ||||
CDS_child (58) | ||||||
Transcript (11) | ||||||
PCR_product | cenix:62-b7 | 6161 | 6763 | |||
mv_T10A3.1 | 3796 | 7812 | ||||
sjj2_F46H5.6 | 988 | 2163 | ||||
sjj_T10A3.1 | 5821 | 6944 | ||||
Allele | WBVar01945653 | 6828 | 6829 | |||
WBVar01487192 | 4533 | 4533 | ||||
WBVar00599134 | 5272 | 5272 | ||||
WBVar00047951 | 2431 | 2431 | ||||
WBVar01825236 | 4229 | 4229 | ||||
WBVar00047956 | 3155 | 3155 | ||||
WBVar00080356 | 2229 | 2229 | ||||
WBVar00080357 | 2941 | 2941 | ||||
WBVar00047961 | 4826 | 4826 | ||||
WBVar00302873 | 4116 | 4116 | ||||
WBVar01489593 | 7970 | 7970 | ||||
WBVar00080358 | 4639 | 4639 | ||||
WBVar00257087 | 988 | 989 | ||||
WBVar00047966 | 8101 | 8101 | ||||
WBVar01469675 | 2522 | 2522 | ||||
WBVar01159702 | 161 | 161 | ||||
WBVar00088859 | 6506 | 6506 | ||||
WBVar00047971 | 8211 | 8211 | ||||
WBVar01159703 | 190 | 190 | ||||
WBVar00088860 | 7303 | 7303 | ||||
WBVar01159704 | 220 | 220 | ||||
WBVar01159705 | 268 | 268 | ||||
WBVar01159706 | 319 | 319 | ||||
WBVar01159707 | 356 | 356 | ||||
WBVar01159708 | 383 | 383 | ||||
WBVar01159709 | 448 | 448 | ||||
WBVar01159710 | 514 | 514 | ||||
WBVar01159711 | 773 | 773 | ||||
WBVar01159712 | 835 | 835 | ||||
WBVar01159713 | 866 | 866 | ||||
WBVar01159714 | 930 | 930 | ||||
WBVar01159715 | 992 | 992 | ||||
WBVar01159716 | 1037 | 1037 | ||||
WBVar01159717 | 1265 | 1265 | ||||
WBVar01159718 | 1314 | 1314 | ||||
WBVar01159719 | 1754 | 1754 | ||||
WBVar01159720 | 2026 | 2026 | ||||
WBVar01159721 | 2117 | 2117 | ||||
WBVar01159722 | 2124 | 2124 | ||||
WBVar01159723 | 2227 | 2227 | ||||
WBVar01159724 | 2247 | 2247 | ||||
WBVar01159725 | 2250 | 2250 | ||||
WBVar01159726 | 2328 | 2328 | ||||
WBVar01159727 | 2345 | 2345 | ||||
WBVar01159728 | 2486 | 2486 | ||||
WBVar01927184 | 226 | 246 | ||||
WBVar01159729 | 2801 | 2801 | ||||
WBVar01159730 | 3265 | 3265 | ||||
WBVar01159731 | 3275 | 3275 | ||||
WBVar01159732 | 3508 | 3508 | ||||
WBVar01490916 | 7573 | 7573 | ||||
WBVar01159733 | 3707 | 3707 | ||||
WBVar01159734 | 3737 | 3737 | ||||
WBVar01159735 | 4152 | 4152 | ||||
WBVar01159736 | 4250 | 4250 | ||||
WBVar02064707 | 2703 | 2704 | ||||
WBVar01159737 | 4317 | 4317 | ||||
WBVar01159738 | 4460 | 4460 | ||||
WBVar01159739 | 4524 | 4524 | ||||
WBVar01159740 | 4538 | 4538 | ||||
WBVar01159741 | 5052 | 5052 | ||||
WBVar01159742 | 5374 | 5374 | ||||
WBVar01159743 | 5751 | 5751 | ||||
WBVar01159744 | 5829 | 5829 | ||||
WBVar01159745 | 5848 | 5848 | ||||
WBVar01703383 | 3244 | 3244 | ||||
WBVar01159746 | 5856 | 5856 | ||||
WBVar01849055 | 410 | 410 | ||||
WBVar01159747 | 5929 | 5929 | ||||
WBVar01159748 | 5952 | 5952 | ||||
WBVar01159749 | 5954 | 5954 | ||||
WBVar01159750 | 5967 | 5967 | ||||
WBVar01159751 | 5973 | 5973 | ||||
WBVar01159752 | 6045 | 6045 | ||||
WBVar01159753 | 6228 | 6228 | ||||
WBVar01159754 | 6259 | 6259 | ||||
WBVar01159755 | 6772 | 6772 | ||||
WBVar01159756 | 6890 | 6890 | ||||
WBVar01159757 | 6920 | 6920 | ||||
WBVar01526750 | 519 | 519 | ||||
WBVar00142961 | 7214 | 7214 | ||||
WBVar01159758 | 7059 | 7059 | ||||
WBVar01159759 | 7061 | 7061 | ||||
WBVar01159760 | 7083 | 7083 | ||||
WBVar01159761 | 7181 | 7181 | ||||
WBVar01159762 | 7277 | 7277 | ||||
WBVar01159763 | 7280 | 7280 | ||||
WBVar01159764 | 7329 | 7329 | ||||
WBVar01159765 | 7446 | 7446 | ||||
WBVar01159766 | 7457 | 7457 | ||||
WBVar01159767 | 7503 | 7503 | ||||
WBVar01159768 | 7750 | 7750 | ||||
WBVar01159769 | 7823 | 7823 | ||||
WBVar01159770 | 7854 | 7854 | ||||
WBVar01159771 | 7890 | 7890 | ||||
WBVar01159772 | 7936 | 7936 | ||||
WBVar00508058 | 160 | 160 | ||||
WBVar00508059 | 344 | 344 | ||||
WBVar00508060 | 412 | 412 | ||||
WBVar00508061 | 446 | 446 | ||||
WBVar00508062 | 858 | 858 | ||||
WBVar00508063 | 905 | 905 | ||||
WBVar00508064 | 1142 | 1142 | ||||
WBVar00508065 | 1338 | 1338 | ||||
WBVar00508066 | 1752 | 1752 | ||||
WBVar00508067 | 1812 | 1812 | ||||
WBVar00508068 | 2027 | 2027 | ||||
WBVar00508069 | 2508 | 2508 | ||||
WBVar00508070 | 2782 | 2782 | ||||
WBVar00508071 | 2980 | 2980 | ||||
WBVar00508072 | 3057 | 3057 | ||||
WBVar00508073 | 3781 | 3781 | ||||
WBVar01815932 | 4886 | 4886 | ||||
WBVar00508074 | 3807 | 3807 | ||||
WBVar00508075 | 3940 | 3940 | ||||
WBVar01758721 | 5862 | 5862 | ||||
WBVar00508076 | 4178 | 4178 | ||||
WBVar00508077 | 4398 | 4398 | ||||
WBVar00508078 | 4672 | 4672 | ||||
WBVar00508079 | 5272 | 5272 | ||||
WBVar00508080 | 5842 | 5842 | ||||
WBVar00508081 | 5876 | 5876 | ||||
WBVar00508082 | 6302 | 6302 | ||||
WBVar00508083 | 6518 | 6518 | ||||
WBVar00508084 | 6772 | 6772 | ||||
WBVar00508085 | 6984 | 6984 | ||||
WBVar01550492 | 2861 | 2861 | ||||
WBVar01883221 | 497 | 497 | ||||
WBVar01883222 | 865 | 865 | ||||
WBVar00508086 | 7015 | 7015 | ||||
WBVar00508087 | 7122 | 7122 | ||||
WBVar01883223 | 1193 | 1193 | ||||
WBVar01883224 | 1318 | 1318 | ||||
WBVar00508088 | 7677 | 7677 | ||||
WBVar00508089 | 7836 | 7836 | ||||
WBVar01883225 | 1513 | 1513 | ||||
WBVar01883226 | 5946 | 5946 | ||||
WBVar00260879 | 5960 | 5961 | ||||
WBVar01883227 | 6491 | 6491 | ||||
WBVar01883228 | 7066 | 7066 | ||||
WBVar01883229 | 7067 | 7067 | ||||
WBVar01883230 | 7136 | 7136 | ||||
WBVar01883231 | 7902 | 7902 | ||||
WBVar00098970 | 8015 | 8015 | ||||
WBVar00600994 | 1803 | 2397 | ||||
WBVar00095004 | 7822 | 7252 | ||||
Oligo_set | Aff_K03A1.3 | 9269 | 8008 | |||
Aff_T10A3.1 | 4541 | 3794 | ||||
Feature_object (31) | ||||||
Feature_data | T10A3:Polysome | 1 | 11647 | |||
T10A3:TranscriptionallyActiveRegion | 1 | 11647 | ||||
T10A3:ChIPSeqTF | 1 | 11647 | ||||
T10A3:TRF | 1 | 11647 | ||||
T10A3:Dust | 1 | 11647 | ||||
Homol_data | T10A3:RNAi | 1 | 11647 | |||
T10A3:SAGE | 1 | 11647 | ||||
T10A3:Mass-spec | 1 | 11647 | ||||
T10A3:wublastx_brenneri | 1 | 11647 | ||||
T10A3:wublastx_briggsae | 1 | 11647 | ||||
T10A3:wublastx_brugia | 1 | 11647 | ||||
T10A3:wublastx_fly | 1 | 11647 | ||||
T10A3:wublastx_human | 1 | 11647 | ||||
T10A3:wublastx_japonica | 1 | 11647 | ||||
T10A3:wublastx_ovolvulus | 1 | 11647 | ||||
T10A3:wublastx_pristionchus | 1 | 11647 | ||||
T10A3:wublastx_remanei | 1 | 11647 | ||||
T10A3:wublastx_slimSwissProt | 1 | 11647 | ||||
T10A3:wublastx_sratti | 1 | 11647 | ||||
T10A3:wublastx_tmuris | 1 | 11647 | ||||
T10A3:wublastx_worm | 1 | 11647 | ||||
T10A3:RepeatMasker | 1 | 11647 | ||||
Structure | From | Source | CHROMOSOME_X | |||
Overlap_right | K03A1 | 7948 | ||||
Overlap_left | F46H5 | |||||
Clone_left_end | K03A1 | 7948 | ||||
Clone_right_end | F46H5 | 200 | ||||
DB_info | Database | EMBL | NDB_AC | FO081400 | ||
NDB_ID | _U41035 | |||||
NDB_SV | FO081400.1 | |||||
Secondary_accession | U41035 | |||||
DB_remark | The 5' clone is F46H5, 800 bp overlap; the 3' clone is K03A1, 3700 bp overlap. Actual start of this clone is at base position 26013 of F46H5; actual end is at 20306 of K03A1. | |||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Sansone J | ||||
Nhan M | ||||||
From_laboratory | RW | |||||
Date | 19 Oct 1995 00:00:00 | |||||
Species | Caenorhabditis elegans | |||||
Visible | Clone | T10A3 | ||||
Remark | added 3500 bp to the 3' end 011219 db | |||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | 4989ae7b22ad26e5850945dff42eb3ec | ||||
Status | Finished | |||||
Submitted | 19 Oct 1995 00:00:00 | |||||
Map | Sequence-X | |||||
Interpolated_map_position | X | -1.78272 | ||||
Method | Genomic_canonical |