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WormBase Tree Display for Gene: WBGene00258965

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Name Class

WBGene00258965SMapS_parentSequenceSRAE_chr1
IdentityVersion1
NameSequence_nameSRAE_1000235100
Molecular_nameSRAE_1000235100
SRAE_1000235100.1
SRP04871
Public_nameSRAE_1000235100
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:53WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000067723.1437From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
24.259From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
26.1275From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
26.3736From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
26.3772From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
26.6748From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
WBls:000067817.1544From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
17.6977From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
19.8225From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
19.9643From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
22.0048From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
22.9598From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
6.56573From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
9.00413From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
WBls:0000680285.134From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:000068297.7361From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
GO_annotation00267306
OrthologWBGene00143570Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00027419Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031108Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00014109Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019108Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00122218Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00241019Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00108268Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111670Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276075Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00059075Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00063691Caenorhabditis remaneiFrom_analysisWormBase-Compara
CBOVI.g730Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g9347Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g12099Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g16399Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g4527Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g18078Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g1053Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g10651Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g2618Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g28012Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g16300Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g23005Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00018.g1179Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00410.g10474Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_V.g19533Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g20790Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g21036Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00100.g4261Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00295.g8874Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_07732Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_15456Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_017597Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_020421Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04603Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g3592Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g4313Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50031500Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50282900Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g13627Caenorhabditis elegansFrom_analysisWormBase-Compara
chrV_pilon.g15444Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00297186Trichuris murisFrom_analysisWormBase-Compara
WBGene00302309Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00256084Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00257362Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00261284Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00261810Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00262301Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Is an ortholog of C. elegans chpf-1 and chpf-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSSRAE_1000235100
Corresponding_transcriptSRAE_1000235100.1
Other_sequenceACC00114_1
MP01701
ES744066.1
EX537201.1
Experimental_infoExpression_clusterWBPaper00050919:up_infective-L3_vs_free-living_mRNA
WBPaper00050919:up_infective-L3_vs_parasitic_mRNA
MethodGene