WormBase Tree Display for Expression_cluster: WBPaper00050919:up_infective-L3_vs_parasitic_mRNA
expand all nodes | collapse all nodes | view schema
| WBPaper00050919:up_infective-L3_vs_parasitic_mRNA | Description | Transcripts that showed significantly increased expression at infective third-stage larva stage, comparing to parasitic female stage (collected from S. ratti-infected rats). | |
|---|---|---|---|
| Species | Strongyloides ratti | ||
| Algorithm | Differentially expressed genes in all pairwise comparisons (parasitic vs. free-living; parasitic vs. iL3; and iL3 vs. free-living) were determined for S.ratti and S.stercoralis using the R (version 3.1.2) package edgeR version 3.6.8. Genes with less than one count per million reads were excluded. Genes were considered to be differentially expressed if the false discovery rate (FDR) was <= 0.001 and the fold change was >= 2. | ||
| Reference | WBPaper00050919 | ||
| Based_on_WB_Release | |||
| Gene (3294) | |||
| Attribute_of | RNASeq | ||
| Regulation | Regulated_by_treatment | parasitic vs free-living. | |
| Associated_with | Life_stage | WBls:0000681 | |
| WBls:0000680 |
