WormBase Tree Display for Gene: WBGene00059075

WBGene00059075 SMap: S_parent: Sequence: Crem_Contig8
  Identity: Version: 3
    Name: CGC_name: Cre-chpf-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE30702
      Molecular_name: CRE30702
        CRE30702.1
        RP06928
      Other_name: cr01.sctg13.wum.258
      Public_name: Cre-chpf-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 03 Jul 2008 11:45:22 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE30702
                Other_name: cr01.sctg13.wum.258
        3 14 Apr 2015 11:01:47 WBPerson2970 Name_change: CGC_name: Cre-chpf-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: chpf
    RNASeq_FPKM: WBls:0000004 55.0008 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        60.5877 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        66.1746 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 26.0528 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        33.1876 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        33.7194 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        41.386 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        56.8062 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        8.50529 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 10.2271 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        48.7401 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        64.954 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        71.0392 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 69.1738 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        72.1463 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        79.0767 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        83.4518 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        83.4675 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        87.8582 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        94.83 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        97.6258 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
      WBls:0000063 (12)
      WBls:0000101 47.7807 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        49.6516 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00154586
    Ortholog (31)
    Paralog: WBGene00054897 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00063691 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00056466 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00064733 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00085826 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable calcium ion binding activity. Is an ortholog of C. elegans chpf-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE30702
    Corresponding_transcript: CRE30702.1
    Other_sequence (99)
  Experimental_info: Expr_pattern: Expr1115451
    Microarray_results: GPL14146_CRE30702_218-277_0.927_3_B
      GPL14146_CRE30702_223-282_0.933_2_A
      GPL14146_CRE30702_456-515_0.870_18_C
  Method: Gene