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WormBase Tree Display for Gene: WBGene00059075

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Name Class

WBGene00059075SMapS_parentSequenceCrem_Contig8
IdentityVersion3
NameCGC_nameCre-chpf-1From_analysisInferred_from_orthology
Sequence_nameCRE30702
Molecular_nameCRE30702
CRE30702.1
RP06928
Other_namecr01.sctg13.wum.258
Public_nameCre-chpf-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
203 Jul 2008 11:45:22WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE30702
Other_namecr01.sctg13.wum.258
314 Apr 2015 11:01:47WBPerson2970Name_changeCGC_nameCre-chpf-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classchpf
RNASeq_FPKMWBls:000000455.0008From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
60.5877From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
66.1746From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:000002410.6675From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
11.7709From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
118.32From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
12.6694From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
13.1103From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
13.6809From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
139.163From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
14.5365From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
15.1574From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
15.7734From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
15.8314From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
161.365From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
16.505From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
16.6409From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
17.6976From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
18.2106From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
19.4519From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
19.5913From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
20.1691From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
20.1898From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
20.9344From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
21.1335From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
22.3149From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
22.6168From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
24.5782From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
25.3268From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
25.3385From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
27.5057From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
30.0451From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
32.3062From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
34.5955From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
36.0761From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
36.0849From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
38.6663From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
43.6347From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
44.4798From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
45.2326From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
47.5344From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
51.0964From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
55.7817From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
56.6566From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
67.7763From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
71.4895From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
7.19189From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
8.49193From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
87.6957From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
89.1186From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
89.6536From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
93.973From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
94.3887From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
94.932From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
9.85248From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
9.87909From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
WBls:000002726.0528From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
33.1876From_analysisRNASeq.remanei.WBls:0000027.control_mean
33.7194From_analysisRNASeq.remanei.WBls:0000027.control_median
41.386From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
56.8062From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
8.50529From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003810.2271From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
48.7401From_analysisRNASeq.remanei.WBls:0000038.control_mean
64.954From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
71.0392From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004169.1738From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
72.1463From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
79.0767From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
83.4518From_analysisRNASeq.remanei.WBls:0000041.control_mean
83.4675From_analysisRNASeq.remanei.WBls:0000041.control_median
87.8582From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
94.83From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
97.6258From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
WBls:000006328.6672From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
32.0534From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
32.8373From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
36.0628From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
37.1023From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
37.4361From_analysisRNASeq.remanei.WBls:0000063.control_median
37.7698From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
37.8223From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
39.0084From_analysisRNASeq.remanei.WBls:0000063.control_mean
45.9689From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
49.5925From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
52.2072From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
WBls:000010147.7807From_analysisRNASeq.remanei.total_over_all_stages.control_median
49.6516From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00154586
OrthologWBGene00014109Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00031108Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00108268Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00143570Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00122218Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WBGene00227826Brugia malayiFrom_analysisWormBase-Compara
WBGene00241019Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244018Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00111670Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276075Pristionchus pacificusFrom_analysisWormBase-Compara
CBOVI.g730Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g9347Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g16399Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP31.g1053Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP38.g2618Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP40.g16300Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00410.g10474Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_V.g19533Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g21036Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00100.g4261Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_07732Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_017597Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04603Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g3592Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g4313Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50282900Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g15444Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00257362Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00258965Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00297186Trichuris murisFrom_analysisWormBase-Compara
WBGene00302309Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00054897Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00063691Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00056466Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00064733Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00085826Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Is an ortholog of C. elegans chpf-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE30702
Corresponding_transcriptCRE30702.1
Other_sequenceDviv_isotig04336
TDC00160_1
FD514451.1
EX547409.1
CJC01383_1
Dviv_isotig04322
Dviv_isotig04335
PPC03401_1
SSC00389_1
ACC18233_1
MPC01293_1
HGC00106_1
Dviv_isotig04326
GR13669
MHC02998_1
AYC01320_1
GRC02890_1
Dviv_isotig04321
RS06863
Dviv_isotig04337
HG03254
ASC02626_1
RSC02221_1
Dviv_isotig04331
Dviv_isotig04323
Oden_isotig17293
AA683449.1
MJC03129_1
EX913545.1
MJ04000
MC00569
PSC00768_1
HG11192
HBC00194_1
AS12748
ACC00114_1
BXC01812_1
MI02880
JI165618.1
Dviv_isotig04324
CSC00399_1
NB06940
PPC01659_1
GW410349.1
NBC01754_1
EY469505.1
AS02874
OVC00267_1
BUC01521_1
Dviv_isotig04320
HC07112
EX910424.1
HCC01988_1
CR09989
MC05316
Dviv_isotig04334
ES744636.1
Hbac_isotig02895
MP01701
MCC05123_1
HC00666
ES741668.1
Dviv_isotig04329
CN477421.1
ES739745.1
Dviv_isotig04330
JI462177.1
Acan_isotig09811
Dviv_isotig04333
MI00867
JI216304.1
AE02293
ES744066.1
Dviv_isotig04327
Dviv_isotig04328
EX561422.1
Dviv_isotig04325
AS09074
Tcir_isotig07859
CB043572.1
Oden_isotig17294
ES412676.1
Name_isotig00945
CBC00350_1
ES413866.1
Dviv_isotig04332
MH02419
HC01398
BE217608.1
MI04348
XIC02933_1
ASC06341_1
EX560373.1
Acan_isotig17513
SS01396
EX537201.1
MIC00956_1
MI02163
OOC03505_1
Experimental_infoExpr_patternExpr1115451
Microarray_resultsGPL14146_CRE30702_218-277_0.927_3_B
GPL14146_CRE30702_223-282_0.933_2_A
GPL14146_CRE30702_456-515_0.870_18_C
MethodGene