Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00247640

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00247640SMapS_parentSequenceOVOC_OM4_111
IdentityVersion2
NameCGC_nameOvo-sgt-1From_analysisInferred_from_orthology
Sequence_nameOVOC10831
Molecular_nameOVOC10831
OVOC10831.1
OVP02411
Public_nameOvo-sgt-1
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:34WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:32WBPerson4055Name_changeCGC_nameOvo-sgt-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsgt
RNASeq_FPKMWBls:000010174.9659From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
83.4237From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
WBls:000010411.2923From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
15.901From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
169.625From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
19.6729From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
21.3577From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
26.6632From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
54.2346From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
56.3268From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
62.7228From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
63.848From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
79.0979From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
82.0061From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
84.8413From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
90.097From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
90.4664From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
93.4153From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
WBls:0000107128.795From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:0000108103.611From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
105.343From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
113.326From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
131.024From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:0000664101.279From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
111.378From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
121.477From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
OrthologWBGene00154000Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00164684Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00025351Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00225489Brugia malayiFrom_analysisWormBase-Compara
WBGene00019893Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00122646Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g6725Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g544Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g9108Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g8582Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16384Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g17238Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g7426Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g9763Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g15815Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g29195Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g5118Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00428.g10743Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_16372.g25348Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-sgt-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g11186Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g11203Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00182.g6467Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_05949Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005901Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02455Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g14514Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20086200Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00057482Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00117732Pristionchus pacificusFrom_analysisWormBase-Compara
chrII_pilon.g4362Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00297457Trichuris murisFrom_analysisWormBase-Compara
WBGene00301108Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00239897Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240035Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241341Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00243153Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248123Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Homodimerisation domain of SGTA; Tetratricopeptide repeat; Tetratricopeptide repeat 1; SGTA, homodimerisation domain; and Tetratricopeptide-like helical domain superfamily. Is an ortholog of C. elegans sgt-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC10831
Corresponding_transcriptOVOC10831.1
Other_sequenceAI511578.1
OVC01900_1
Oden_isotig07562
NAC00749_1
ES740677.1
GW409106.1
Oden_isotig07561
AYC01859_1
PPC04777_1
FC815104.1
ES570909.1
ES564516.1
GE626280.1
CSC00542_1
Tcir_isotig17149
FC818521.1
MH00928
EW743593.1
DN557622.1
PT01375
ES741271.1
FK804178.1
HG02767
LSC00741_1
EW744546.1
FC809766.1
Hbac_isotig01750
ES743622.1
GW408343.1
EX549659.1
ES412989.1
FC815681.1
PSC00168
MCC02355_1
ACC10877_1
EX916351.1
Acan_isotig06168
HG03549
Oden_isotig07563
HBC02755_1
MHC02774_1
FC821112.1
Name_isotig01453
AE03200
AYC01859_2
BU665980.1
Dviv_isotig24570
EX560470.1
ES739854.1
Dviv_isotig28589
NB08367
FD514549.1
GO252527.1
GW407807.1
Tcol_isotig11531
EX543274.1
SS01109
AE02667
Acan_isotig06167
EX547237.1
Tcol_isotig11532
JI165037.1
HGC00694_1
Tcir_isotig03480
DN557874.1
PP01068
CBC02486_1
MC03124
CJC16977_1
AE00026
ES569067.1
ES273586.1
FC819753.1
BXC00387_1
HSC00711_1
HCC01343_1
FK805570.1
Oden_isotig07564
FF679075.1
CR02599
EX914023.1
EX916072.1
PTC00837_1
ES740122.1
AE00025
GR12113
NBC00738_1
CRC03034_1
JO470086.1
HC01547
TSC06566_1
HS01432
SSC03866_1
BMC03678_1
HG07618
FK803145.1
GRC00858_1
SR00901
BUC01551_1
AE00040
MethodGene