WormBase Tree Display for Gene: WBGene00122646

WBGene00122646 SMap: S_parent: Sequence: Cjap.Contig17641
  Identity: Version: 2
    Name: CGC_name: Cjp-sgt-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA03442
      Molecular_name: CJA03442
        CJA03442.1
        JA35432
      Public_name: Cjp-sgt-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:20 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-sgt-1
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sgt
    RNASeq_FPKM: WBls:0000004 194.848 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 255.162 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 243.847 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        247.84 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        251.834 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 245.828 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        261.142 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        276.679 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        277.651 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        278.536 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        280.534 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        282.533 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        287.925 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        289.286 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        290.528 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
      WBls:0000101 243.009 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        261.142 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    Ortholog (37)
    Paralog: WBGene00130978 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00121037 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00129537 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00134316 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00137549 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00138144 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00178791 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00208667 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00210287 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00216349 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Homodimerisation domain of SGTA; Tetratricopeptide repeat; Tetratricopeptide repeat 1; SGTA, homodimerisation domain; and Tetratricopeptide-like helical domain superfamily. Is an ortholog of C. elegans sgt-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA03442
    Corresponding_transcript: CJA03442.1
    Other_sequence (88)
  Experimental_info: Expr_pattern: Expr1074741
    Microarray_results: GPL14145_CJA03442_549-608_0.735_86_C
      GPL14145_CJA03442_891-950_0.789_64_B
      GPL14145_CJA03442_904-963_0.916_9_A
  Method: Gene