WormBase Tree Display for Gene: WBGene00152160

WBGene00152160 SMap: S_parent: Sequence: Cbre_Contig170
  Identity: Version: 2
    Name: CGC_name: Cbn-unc-122 From_analysis: Inferred_from_orthology
      Sequence_name: CBN13435
      Molecular_name: CBN13435
        CBN13435.1
        CN30453
      Public_name: Cbn-unc-122
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:51 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-unc-122
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000002 0.158066 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        0.222602 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        0.34658 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        1.0893 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        1.99583 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
            RNASeq.brenneri.WBls:0000002.control_median
      WBls:0000004 0.072674 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0.145348 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        2.11902 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        2.34558 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        2.82942 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        3.01203 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        3.47693 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 1.0852 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        1.20085 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        1.3165 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 0.134309 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
        0.159975 From_analysis: RNASeq.brenneri.WBls:0000041.control_median
        0.185641 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
        0.199942 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
        0.333129 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
        0.426348 From_analysis: RNASeq.brenneri.WBls:0000041.control_mean
        0.530743 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
        0.629873 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
        0.805157 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
        1.46379 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
        2.53898 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
      WBls:0000101 0.134309 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        0.414013 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog: WBGene00006845 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00038898 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00060887 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00104188 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00132561 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CSP21.g5711 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g19748 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8262 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g13382 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g22982 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g9263 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g22104 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g9216 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g12499 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00265.g8134 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-122 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g18982 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02318.g25949 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_09139 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_001458 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12064 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g16539 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10010510 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00223567 Brugia malayi From_analysis: WormBase-Compara
      chrI_pilon.g2984 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00237993 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00260092 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00287578 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00160276 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00194481 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00194434 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Olfactomedin-like domain; Collagen triple helix repeat; and Collagen triple helix repeat (20 copies). Is an ortholog of C. elegans unc-122. In C. elegans, unc-122 is involved in negative regulation of cholinergic synaptic transmission. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN13435
    Corresponding_CDS_history: CBN13435:np197
    Corresponding_transcript: CBN13435.1
    Other_sequence: TX00699
      FG974196.1
      CJC14375_1
      Dviv_isotig23408
      Oden_isotig20407
      Acan_isotig19592
      HBC12720_1
      Acan_isotig17984
      JI172100.1
      TX00701
      Oden_isotig21653
      TCC00080_1
      Hbac_isotig07556
  Experimental_info: Microarray_results: GPL14142_CBN13435_580-639_0.660_160_C
      GPL14142_CBN13435_1004-1063_0.874_34_B
      GPL14142_CBN13435_1235-1294_0.921_13_A
  Method: Gene